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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0007G01520
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0007G01520
Aureococcus anophagefferens
1.0e-255
883.6
469
100.0
AA0010G02650
Aureococcus anophagefferens
1.3e-91
338.6
366
49.7
Sro330_g118940
Seminavis robusta
1.0e-80
302.4
368
45.1
sya00G131370
Synedra acus
2.7e-78
294.3
421
40.9
ptri171980
Phaeodactylum tricornutum
6.1e-78
293.1
436
40.8
ps00G178250
Pseudo-nitzschia multiseries
1.3e-77
292.0
423
40.2
sya00G261150
Synedra acus
5.1e-77
290.0
421
40.6
tho206180
Thalassiosira oceanica
6.7e-77
289.7
410
42.0
tps22760
Thalassiosira pseudonana
8.7e-77
289.3
404
42.1
fso149140
Fistulifera solaris
1.1e-76
288.9
419
39.6
sya00G232500
Synedra acus
1.1e-76
288.9
421
40.4
fso178520
Fistulifera solaris
2.2e-75
284.6
419
39.4
CC00G29390
Cyclotella cryptica
2.8e-75
284.3
410
41.2
gene11441
Fragilariopsis cylindrus
1.1e-74
282.3
412
40.5
AT3G02570
Arabidopsis thaliana
4.8e-51
203.8
380
34.5
Pp3c16_5490
Physcomitrella patens
8.8e-45
183.0
424
31.6
ENSG00000178802
Homo sapiens
2.0e-44
181.8
381
34.1
Naga_100003g59
Nannochloropsis gaditana
3.4e-44
181.0
396
33.1
Pp3c6_14770
Physcomitrella patens
1.3e-43
179.1
427
32.1
ccr190460
Chondrus crispus
2.8e-43
177.9
397
32.5
AT1G67070
Arabidopsis thaliana
5.4e-42
173.7
378
30.7
CM17G03590
Cyanidioschyzon merolae
3.5e-41
171.0
399
35.3
Cre02.g147650
Chlamydomonas reinhardtii
2.3e-40
168.3
430
32.1
Ec-20_000830
Ectocarpus siliculosus
5.2e-37
157.1
496
27.4
Ec-27_005440
Ectocarpus siliculosus
8.9e-37
156.4
420
28.8
emh210000
Emiliania huxleyi
4.9e-35
150.6
362
33.4
SPBC2G2.16
Schizosaccharomyces pombe
4.1e-34
147.5
381
30.2
FBgn0037744
Drosophila melanogaster
1.1e-31
139.4
346
28.6
WBGene00014013
Caenorhabditis elegans
8.9e-29
129.8
364
27.5
WBGene00015464
Caenorhabditis elegans
1.1e-26
122.9
387
28.2
gsu60230
Galdieria sulphuraria
7.0e-26
120.2
349
28.9
Ec-28_000050
Ectocarpus siliculosus
1.6e-25
119.0
298
28.5
YER003C
Saccharomyces cerevisiae strain S288C
6.0e-25
117.1
379
27.2
Ec-28_000080
Ectocarpus siliculosus
2.1e-22
108.6
223
33.2
pte43760
Paramecium tetraurelia
2.7e-17
91.7
386
23.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing