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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G03690
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G03690
Aureococcus anophagefferens
0.0e+00
1779.2
1352
100.0
emh129350
Emiliania huxleyi
4.1e-18
95.9
99
53.5
Ec-26_003270
Ectocarpus siliculosus
3.2e-15
86.3
264
30.7
emh741820
Emiliania huxleyi
2.0e-12
77.0
97
46.4
emh373810
Emiliania huxleyi
2.0e-12
77.0
97
46.4
emh52720
Emiliania huxleyi
2.0e-12
77.0
97
46.4
emh509380
Emiliania huxleyi
2.8e-11
73.2
92
43.5
emh299810
Emiliania huxleyi
2.8e-11
73.2
92
43.5
AA0028G00280
Aureococcus anophagefferens
2.4e-10
70.1
259
28.2
AT3G62690
Arabidopsis thaliana
1.3e-08
64.3
90
33.3
AA0011G01930
Aureococcus anophagefferens
5.5e-07
58.9
362
25.7
AT2G47560
Arabidopsis thaliana
3.6e-06
56.2
49
42.9
gsu122750
Galdieria sulphuraria
3.6e-06
56.2
52
46.2
tho260120
Thalassiosira oceanica
3.6e-06
56.2
77
40.3
tho339580
Thalassiosira oceanica
4.7e-06
55.8
77
40.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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