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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G02340
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G02340
Aureococcus anophagefferens
0.0e+00
2781.9
1581
100.0
AT1G79350
Arabidopsis thaliana
2.9e-124
448.7
1573
27.8
Pp3c3_5410
Physcomitrella patens
3.7e-119
431.8
1602
28.2
AA0069G00180
Aureococcus anophagefferens
5.0e-108
394.8
482
47.5
ENSG00000139697
Homo sapiens
1.0e-105
387.1
1529
29.4
WBGene00002889
Caenorhabditis elegans
1.1e-104
383.6
1549
31.2
FBgn0265630
Drosophila melanogaster
2.4e-102
375.9
1092
38.3
FBgn0028887
Drosophila melanogaster
3.0e-97
359.0
1134
29.5
ENSG00000064932
Homo sapiens
1.7e-95
353.2
1091
30.1
ENSG00000278788
Homo sapiens
1.7e-95
353.2
1091
30.1
tps88190
Thalassiosira pseudonana
1.1e-94
350.5
1461
28.7
tho85400
Thalassiosira oceanica
7.7e-93
344.4
1171
33.1
Ec-25_003770
Ectocarpus siliculosus
7.0e-86
321.2
1508
26.7
emh699720
Emiliania huxleyi
4.2e-83
312.0
1641
26.2
AA0020G00460
Aureococcus anophagefferens
3.0e-81
305.8
452
44.9
Ec-27_000880
Ectocarpus siliculosus
2.0e-77
293.1
651
33.0
tho88540
Thalassiosira oceanica
3.2e-70
269.2
1480
25.0
AA0069G00170
Aureococcus anophagefferens
7.0e-70
268.1
616
34.9
tho99680
Thalassiosira oceanica
1.3e-68
263.8
1486
26.0
Cre13.g578501
Chlamydomonas reinhardtii
4.3e-67
258.8
1465
25.2
tho321560
Thalassiosira oceanica
6.2e-66
255.0
1045
29.7
Sro106_g053630
Seminavis robusta
2.3e-65
253.1
1089
25.8
tho188980
Thalassiosira oceanica
4.4e-64
248.8
1428
24.5
PSNMU-V1.4_AUG-EV-PASAV3_0063780
Pseudo-nitzschia multistriata
7.8e-61
238.0
1469
23.2
emh547680
Emiliania huxleyi
2.5e-59
233.0
397
39.0
emh488900
Emiliania huxleyi
5.6e-59
231.9
421
37.8
ps00G60710
Pseudo-nitzschia multiseries
2.1e-58
229.9
1344
23.3
Cre07.g350100
Chlamydomonas reinhardtii
4.7e-58
228.8
1144
25.1
Ec-02_002340
Ectocarpus siliculosus
1.7e-55
220.3
312
44.6
Naga_100003g40
Nannochloropsis gaditana
2.2e-55
219.9
464
34.1
Cre01.g053250
Chlamydomonas reinhardtii
7.8e-53
211.5
538
32.0
Cre02.g095045
Chlamydomonas reinhardtii
9.6e-51
204.5
694
30.4
Ec-02_002400
Ectocarpus siliculosus
1.2e-48
197.6
243
47.3
emh547660
Emiliania huxleyi
3.9e-44
182.6
634
28.9
gene12589
Fragilariopsis cylindrus
1.3e-42
177.6
196
52.0
emh153850
Emiliania huxleyi
4.8e-42
175.6
232
47.0
emh664850
Emiliania huxleyi
2.4e-41
173.3
1049
23.8
emh93450
Emiliania huxleyi
6.4e-39
165.2
171
55.0
gene2194
Fragilariopsis cylindrus
1.0e-36
157.9
363
33.1
AA0246G00010
Aureococcus anophagefferens
1.5e-35
154.1
164
55.5
tho272880
Thalassiosira oceanica
8.4e-31
138.3
162
51.9
Ec-00_006260
Ectocarpus siliculosus
2.0e-24
117.1
145
45.5
emh697180
Emiliania huxleyi
8.7e-20
101.7
126
48.4
tho94140
Thalassiosira oceanica
1.8e-17
94.0
153
41.2
Ec-00_006240
Ectocarpus siliculosus
2.3e-12
77.0
176
34.1
Ec-23_001610
Ectocarpus siliculosus
4.1e-09
66.2
67
44.8
Sro709_g190850
Seminavis robusta
4.1e-09
66.2
63
44.4
PSNMU-V1.4_AUG-EV-PASAV3_0045560
Pseudo-nitzschia multistriata
1.2e-08
64.7
66
45.5
ptri82050
Phaeodactylum tricornutum
7.7e-08
62.0
86
36.0
AA0018G00330
Aureococcus anophagefferens
2.2e-07
60.5
67
43.3
PSNMU-V1.4_AUG-EV-PASAV3_0097770
Pseudo-nitzschia multistriata
2.9e-07
60.1
54
46.3
tho188560
Thalassiosira oceanica
2.9e-07
60.1
80
42.5
Ec-23_001670
Ectocarpus siliculosus
8.5e-07
58.5
85
37.6
tho34560
Thalassiosira oceanica
8.5e-07
58.5
72
38.9
emh49470
Emiliania huxleyi
2.5e-06
57.0
64
37.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (9 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (8 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing