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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G00950
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G00950
Aureococcus anophagefferens
0.0e+00
1610.1
788
100.0
AA0009G03050
Aureococcus anophagefferens
0.0e+00
1595.9
788
99.1
AA0021G00710
Aureococcus anophagefferens
0.0e+00
1559.7
788
96.3
Naga_100034g6
Nannochloropsis gaditana
0.0e+00
1181.4
792
70.2
Ec-21_002920
Ectocarpus siliculosus
0.0e+00
1150.6
800
69.4
ptri219800
Phaeodactylum tricornutum
0.0e+00
1140.9
813
67.0
sya00G221940
Synedra acus
0.0e+00
1132.5
810
67.2
fso45240
Fistulifera solaris
0.0e+00
1132.1
801
67.8
fso18700
Fistulifera solaris
0.0e+00
1130.2
801
67.7
tps128970
Thalassiosira pseudonana
0.0e+00
1122.5
814
65.6
Sro399_g134840
Seminavis robusta
0.0e+00
1121.3
809
67.0
CC00G39370
Cyclotella cryptica
0.0e+00
1119.4
812
65.8
gene13281
Fragilariopsis cylindrus
0.0e+00
1110.5
777
67.2
PSNMU-V1.4_AUG-EV-PASAV3_0005380
Pseudo-nitzschia multistriata
0.0e+00
1102.8
763
68.4
ps00G07360
Pseudo-nitzschia multiseries
0.0e+00
1097.4
769
67.6
tho73320
Thalassiosira oceanica
1.1e-310
1067.0
790
64.8
CM13G03230
Cyanidioschyzon merolae
3.3e-310
1065.4
780
65.3
ENSG00000167325
Homo sapiens
8.9e-308
1057.4
757
65.1
ccr33860
Chondrus crispus
2.6e-307
1055.8
802
62.8
gsu84250
Galdieria sulphuraria
6.4e-306
1051.2
759
65.9
SPAC1F7.05
Schizosaccharomyces pombe
6.4e-306
1051.2
757
64.6
Pp3c5_8430
Physcomitrella patens
8.3e-306
1050.8
814
61.2
Pp3c6_14810
Physcomitrella patens
3.2e-305
1048.9
814
60.9
AT2G21790
Arabidopsis thaliana
1.7e-303
1043.1
817
61.0
YER070W
Saccharomyces cerevisiae strain S288C
4.4e-299
1028.5
770
62.7
WBGene00004391
Caenorhabditis elegans
8.4e-298
1024.2
786
61.6
FBgn0011703
Drosophila melanogaster
4.1e-297
1021.9
805
60.5
Cre12.g492950
Chlamydomonas reinhardtii
8.1e-293
1007.7
783
61.7
YIL066C
Saccharomyces cerevisiae strain S288C
2.4e-289
996.1
780
60.9
Naga_100108g10
Nannochloropsis gaditana
2.7e-288
992.6
791
60.2
Ec-11_002180
Ectocarpus siliculosus
4.8e-277
955.3
649
70.3
pte663260
Paramecium tetraurelia
3.2e-265
916.0
772
57.6
gene2100
Fragilariopsis cylindrus
7.9e-264
911.4
772
58.0
AA0016G01460
Aureococcus anophagefferens
1.5e-262
907.1
458
96.7
sya00G162990
Synedra acus
5.1e-255
882.1
824
54.1
ps00G68260
Pseudo-nitzschia multiseries
8.7e-255
881.3
845
54.0
fso30680
Fistulifera solaris
1.7e-253
877.1
818
54.8
tho107100
Thalassiosira oceanica
2.2e-253
876.7
852
52.9
PSNMU-V1.4_AUG-EV-PASAV3_0064210
Pseudo-nitzschia multistriata
6.3e-253
875.2
798
56.0
tps144930
Thalassiosira pseudonana
1.2e-251
870.9
822
54.1
Ec-06_005120
Ectocarpus siliculosus
1.4e-249
864.0
790
53.9
gene6322
Fragilariopsis cylindrus
2.1e-248
860.1
797
54.7
fso119370
Fistulifera solaris
7.4e-246
851.7
773
56.8
Sro785_g202090
Seminavis robusta
7.4e-238
825.1
849
50.8
CC00G109190
Cyclotella cryptica
2.2e-237
823.5
842
51.7
emh680610
Emiliania huxleyi
5.3e-236
818.9
755
54.0
pte753340
Paramecium tetraurelia
3.6e-224
779.6
585
62.7
ptri146410
Phaeodactylum tricornutum
7.0e-212
738.8
696
53.7
AA0644G00010
Aureococcus anophagefferens
2.7e-203
710.3
343
99.4
emh517270
Emiliania huxleyi
3.8e-181
636.7
491
62.1
AA0044G00360
Aureococcus anophagefferens
5.3e-119
430.3
212
99.5
gsu05760
Galdieria sulphuraria
2.6e-113
411.4
659
36.7
emh07130
Emiliania huxleyi
3.4e-81
304.7
262
56.5
Ec-17_003700
Ectocarpus siliculosus
9.8e-81
303.1
237
60.3
AA0009G03030
Aureococcus anophagefferens
5.4e-79
297.4
149
99.3
emh48490
Emiliania huxleyi
1.3e-61
239.6
255
46.7
AA0044G00350
Aureococcus anophagefferens
1.0e-45
186.8
86
98.8
ps00G85260
Pseudo-nitzschia multiseries
2.2e-40
169.1
135
61.5
sya00G266120
Synedra acus
3.5e-38
161.8
481
26.6
Pp3c22_3180
Physcomitrella patens
3.9e-37
158.3
156
52.6
emh417920
Emiliania huxleyi
1.3e-32
143.3
147
48.3
ptri146390
Phaeodactylum tricornutum
1.1e-31
140.2
105
63.8
pte753360
Paramecium tetraurelia
1.8e-29
132.9
157
47.1
tho243460
Thalassiosira oceanica
4.3e-20
101.7
96
55.2
emh517290
Emiliania huxleyi
8.2e-19
97.4
87
57.5
Pp3c22_4130
Physcomitrella patens
6.9e-18
94.4
62
69.4
Ec-11_002170
Ectocarpus siliculosus
1.4e-13
80.1
56
67.9
emh551450
Emiliania huxleyi
3.2e-07
58.9
42
61.9
AA0040G00610
Aureococcus anophagefferens
3.6e-06
55.5
73
45.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (9 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing