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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0005G02160
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0005G02160
Aureococcus anophagefferens
6.2e-183
641.3
320
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0048120
Pseudo-nitzschia multistriata
9.1e-134
478.0
323
72.8
fso62400
Fistulifera solaris
2.5e-131
469.9
323
72.4
fso98420
Fistulifera solaris
2.5e-131
469.9
323
72.4
gene6205
Fragilariopsis cylindrus
2.1e-130
466.8
323
71.2
gene17537
Fragilariopsis cylindrus
2.1e-130
466.8
323
71.2
ptri174380
Phaeodactylum tricornutum
2.0e-128
460.3
323
70.9
ps00G91650
Pseudo-nitzschia multiseries
2.6e-128
459.9
307
73.6
tho482640
Thalassiosira oceanica
4.4e-128
459.1
323
70.0
Sro690_g187610
Seminavis robusta
2.2e-127
456.8
323
70.0
CC00G66390
Cyclotella cryptica
2.8e-127
456.4
323
69.0
CC00G84300
Cyclotella cryptica
2.8e-127
456.4
323
69.0
CC00G153950
Cyclotella cryptica
2.8e-127
456.4
323
69.0
tps111280
Thalassiosira pseudonana
1.5e-123
444.1
304
71.4
sya00G76430
Synedra acus
3.8e-116
419.5
370
58.4
emh503150
Emiliania huxleyi
2.0e-101
370.5
322
59.0
tps107680
Thalassiosira pseudonana
1.0e-89
331.6
321
50.5
sya00G260320
Synedra acus
6.8e-89
328.9
322
53.1
ps00G17900
Pseudo-nitzschia multiseries
1.7e-84
314.3
324
50.9
sya00G232260
Synedra acus
4.3e-83
309.7
215
69.8
CC00G12250
Cyclotella cryptica
2.1e-74
280.8
274
50.7
AT5G61510
Arabidopsis thaliana
1.9e-46
188.0
324
36.7
Pp3c3_23630
Physcomitrella patens
4.3e-43
176.8
325
36.3
Pp3c3_23550
Physcomitrella patens
4.3e-43
176.8
325
36.3
YBR046C
Saccharomyces cerevisiae strain S288C
3.7e-42
173.7
325
31.7
SPCC1442.16c
Schizosaccharomyces pombe
9.0e-41
169.1
323
34.7
sya00G94110
Synedra acus
7.4e-27
122.9
279
32.6
AT1G49670
Arabidopsis thaliana
2.6e-24
114.4
340
31.8
Pp3c12_2540
Physcomitrella patens
7.7e-24
112.8
334
30.2
sya00G44440
Synedra acus
1.3e-23
112.1
332
31.3
AT4G21580
Arabidopsis thaliana
1.6e-21
105.1
332
29.2
Cre16.g674050
Chlamydomonas reinhardtii
1.6e-21
105.1
320
28.1
emh301610
Emiliania huxleyi
2.1e-21
104.8
323
31.0
emh113560
Emiliania huxleyi
2.1e-21
104.8
323
31.0
ENSG00000180011
Homo sapiens
3.6e-21
104.0
237
34.2
ENSG00000108828
Homo sapiens
3.0e-20
100.9
342
27.5
ENSG00000116791
Homo sapiens
8.8e-20
99.4
318
25.5
Ec-17_002760
Ectocarpus siliculosus
1.1e-19
99.0
327
29.7
Pp3c11_25890
Physcomitrella patens
1.1e-19
99.0
330
30.0
ps00G40910
Pseudo-nitzschia multiseries
7.4e-19
96.3
332
28.9
sya00G181380
Synedra acus
2.2e-18
94.7
347
27.1
Pp3s30_80
Physcomitrella patens
1.4e-17
92.0
347
26.2
Cre16.g677950
Chlamydomonas reinhardtii
2.0e-16
88.2
319
29.2
AA0006G05520
Aureococcus anophagefferens
2.6e-16
87.8
245
30.6
Pp3c2_37490
Physcomitrella patens
3.4e-16
87.4
339
28.0
Pp3c2_37350
Physcomitrella patens
3.4e-16
87.4
339
28.0
WBGene00009554
Caenorhabditis elegans
5.9e-16
86.7
242
30.6
Naga_100093g2
Nannochloropsis gaditana
5.9e-16
86.7
313
27.2
emh753300
Emiliania huxleyi
1.4e-14
82.0
342
26.6
Pp3c14_1550
Physcomitrella patens
1.4e-14
82.0
338
27.8
ENSG00000115129
Homo sapiens
1.9e-14
81.6
338
25.7
sya00G76420
Synedra acus
1.9e-14
81.6
55
67.3
CM19G02210
Cyanidioschyzon merolae
7.2e-14
79.7
320
24.7
Pp3c16_1190
Physcomitrella patens
9.4e-14
79.3
317
26.5
gene6780
Fragilariopsis cylindrus
1.0e-12
75.9
333
25.5
Pp3c7_23980
Physcomitrella patens
1.0e-12
75.9
337
26.1
CM13G01000
Cyanidioschyzon merolae
1.4e-12
75.5
320
24.4
CC00G11550
Cyclotella cryptica
1.4e-12
75.5
347
23.1
gsu104050
Galdieria sulphuraria
3.0e-12
74.3
245
26.9
emh658870
Emiliania huxleyi
3.9e-12
73.9
222
29.7
AT4G13010
Arabidopsis thaliana
5.1e-12
73.6
331
25.4
gene7914
Fragilariopsis cylindrus
6.7e-12
73.2
345
25.5
SPCC13B11.01
Schizosaccharomyces pombe
1.5e-11
72.0
244
24.2
ccr102960
Chondrus crispus
2.0e-11
71.6
334
26.9
emh339390
Emiliania huxleyi
5.7e-11
70.1
363
26.2
sya00G152490
Synedra acus
5.7e-11
70.1
337
26.1
emh395430
Emiliania huxleyi
1.3e-10
68.9
324
26.2
pte151890
Paramecium tetraurelia
1.3e-10
68.9
329
21.6
ccr102980
Chondrus crispus
2.8e-10
67.8
337
26.4
WBGene00010791
Caenorhabditis elegans
3.7e-10
67.4
272
22.8
AT3G15090
Arabidopsis thaliana
8.2e-10
66.2
333
24.3
Pp3c1_4270
Physcomitrella patens
1.8e-09
65.1
304
26.6
Naga_100028g49
Nannochloropsis gaditana
2.4e-09
64.7
330
23.3
WBGene00010790
Caenorhabditis elegans
3.1e-09
64.3
265
21.1
gsu130840
Galdieria sulphuraria
3.1e-09
64.3
333
25.8
Naga_100007g48
Nannochloropsis gaditana
1.2e-08
62.4
330
23.0
gsu25190
Galdieria sulphuraria
2.0e-08
61.6
205
26.3
YBR145W
Saccharomyces cerevisiae strain S288C
2.0e-08
61.6
283
21.9
Naga_101380g1
Nannochloropsis gaditana
4.5e-08
60.5
228
28.5
Pp3c15_2540
Physcomitrella patens
1.7e-07
58.5
200
28.0
Sro227_g092260
Seminavis robusta
2.2e-07
58.2
331
27.8
pte177740
Paramecium tetraurelia
2.9e-07
57.8
122
28.7
emh06700
Emiliania huxleyi
3.8e-07
57.4
62
46.8
Pp3c9_1500
Physcomitrella patens
3.8e-07
57.4
202
26.2
WBGene00012375
Caenorhabditis elegans
5.0e-07
57.0
290
25.2
AA0040G00460
Aureococcus anophagefferens
6.5e-07
56.6
229
27.1
Naga_100001g49
Nannochloropsis gaditana
1.1e-06
55.8
327
22.3
Cre10.g449750
Chlamydomonas reinhardtii
1.5e-06
55.5
232
26.7
YMR083W
Saccharomyces cerevisiae strain S288C
1.5e-06
55.5
284
20.8
Sro777_g200990
Seminavis robusta
1.9e-06
55.1
349
22.1
PSNMU-V1.4_AUG-EV-PASAV3_0060670
Pseudo-nitzschia multistriata
2.5e-06
54.7
348
21.6
pte776150
Paramecium tetraurelia
2.5e-06
54.7
114
30.7
Ec-07_005200
Ectocarpus siliculosus
3.2e-06
54.3
302
25.8
Pp3c26_10280
Physcomitrella patens
3.2e-06
54.3
165
30.3
Sro28_g018870
Seminavis robusta
4.2e-06
53.9
253
25.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (8 genes)
Physcomitrella patens (14 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing