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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0005G01580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0005G01580
Aureococcus anophagefferens
8.5e-191
667.5
336
100.0
Pp3c14_26420
Physcomitrella patens
2.9e-34
147.5
308
36.4
Naga_100213g10
Nannochloropsis gaditana
1.2e-30
135.6
345
29.0
Sro344_g122140
Seminavis robusta
3.7e-29
130.6
332
29.2
ENSG00000106853
Homo sapiens
3.2e-28
127.5
315
29.5
AT5G16990
Arabidopsis thaliana
9.2e-28
125.9
324
31.8
emh513730
Emiliania huxleyi
2.0e-27
124.8
339
32.2
AT1G65560
Arabidopsis thaliana
1.0e-26
122.5
303
32.3
SPAPB24D3.08c
Schizosaccharomyces pombe
1.3e-26
122.1
320
30.9
AT5G16970
Arabidopsis thaliana
1.7e-26
121.7
318
31.1
AT5G17000
Arabidopsis thaliana
5.0e-26
120.2
309
31.7
ccr150820
Chondrus crispus
5.0e-26
120.2
328
31.1
Pp3c1_6990
Physcomitrella patens
6.6e-26
119.8
308
31.5
emh655430
Emiliania huxleyi
2.5e-25
117.9
348
31.3
AT5G16960
Arabidopsis thaliana
4.3e-25
117.1
306
31.4
AT1G26320
Arabidopsis thaliana
9.5e-25
115.9
317
30.6
AT3G03080
Arabidopsis thaliana
2.8e-24
114.4
319
30.1
ps00G147920
Pseudo-nitzschia multiseries
3.6e-24
114.0
288
32.6
WBGene00010911
Caenorhabditis elegans
4.7e-24
113.6
333
27.9
pte426470
Paramecium tetraurelia
2.3e-23
111.3
337
27.3
AT5G37980
Arabidopsis thaliana
4.0e-23
110.5
316
28.5
ENSG00000140043
Homo sapiens
4.0e-23
110.5
325
29.2
pte390730
Paramecium tetraurelia
6.8e-23
109.8
325
27.1
pte416430
Paramecium tetraurelia
6.8e-23
109.8
340
27.4
ENSG00000180011
Homo sapiens
8.9e-23
109.4
323
31.9
AT5G16980
Arabidopsis thaliana
1.2e-22
109.0
214
35.5
AT3G59845
Arabidopsis thaliana
1.5e-22
108.6
308
30.2
AT5G38000
Arabidopsis thaliana
2.0e-22
108.2
315
28.6
pte325990
Paramecium tetraurelia
2.0e-22
108.2
325
27.4
PSNMU-V1.4_AUG-EV-PASAV3_0071510
Pseudo-nitzschia multistriata
7.5e-22
106.3
327
30.3
sya00G212780
Synedra acus
1.7e-21
105.1
229
33.2
emh716520
Emiliania huxleyi
3.7e-21
104.0
328
28.0
AA0006G05520
Aureococcus anophagefferens
4.9e-21
103.6
293
30.4
emh655410
Emiliania huxleyi
4.9e-21
103.6
270
33.3
emh513750
Emiliania huxleyi
4.9e-21
103.6
270
33.3
emh248770
Emiliania huxleyi
8.3e-21
102.8
347
28.2
AT5G37940
Arabidopsis thaliana
1.9e-20
101.7
315
27.3
emh170150
Emiliania huxleyi
3.2e-20
100.9
273
32.2
Sro1718_g293330
Seminavis robusta
1.7e-18
95.1
317
26.5
ps00G90570
Pseudo-nitzschia multiseries
1.1e-17
92.4
246
30.9
gene7914
Fragilariopsis cylindrus
1.9e-17
91.7
289
27.3
ps00G77670
Pseudo-nitzschia multiseries
3.3e-17
90.9
321
28.0
pte34130
Paramecium tetraurelia
3.3e-17
90.9
331
24.2
pte74800
Paramecium tetraurelia
5.6e-17
90.1
350
25.7
AA0034G00050
Aureococcus anophagefferens
9.5e-17
89.4
318
25.5
PSNMU-V1.4_AUG-EV-PASAV3_0055490
Pseudo-nitzschia multistriata
2.1e-16
88.2
339
26.8
tps04730
Thalassiosira pseudonana
2.1e-16
88.2
319
26.6
Pp3c11_25890
Physcomitrella patens
8.1e-16
86.3
224
29.9
gene5191
Fragilariopsis cylindrus
8.9e-15
82.8
199
29.1
Cre16.g677950
Chlamydomonas reinhardtii
2.0e-14
81.6
221
31.7
AA0009G01030
Aureococcus anophagefferens
2.6e-14
81.3
232
28.0
gene5758
Fragilariopsis cylindrus
2.6e-14
81.3
199
29.6
tho192240
Thalassiosira oceanica
2.9e-13
77.8
228
29.4
AT1G49670
Arabidopsis thaliana
8.3e-13
76.3
193
29.5
emh452690
Emiliania huxleyi
4.1e-12
73.9
281
30.2
ptri04200
Phaeodactylum tricornutum
5.4e-12
73.6
227
30.0
emh194500
Emiliania huxleyi
7.1e-12
73.2
281
30.2
Cre16.g674050
Chlamydomonas reinhardtii
2.7e-11
71.2
275
29.5
gene19246
Fragilariopsis cylindrus
4.6e-11
70.5
320
25.3
AT3G56460
Arabidopsis thaliana
3.0e-10
67.8
203
30.0
ENSG00000116791
Homo sapiens
3.0e-10
67.8
245
29.0
SPCC1442.16c
Schizosaccharomyces pombe
3.0e-10
67.8
221
29.9
emh301610
Emiliania huxleyi
5.6e-09
63.5
283
28.6
emh113560
Emiliania huxleyi
5.6e-09
63.5
283
28.6
AA0014G01250
Aureococcus anophagefferens
3.6e-08
60.8
277
29.2
WBGene00009554
Caenorhabditis elegans
2.4e-07
58.2
241
24.9
YBR046C
Saccharomyces cerevisiae strain S288C
5.2e-07
57.0
219
28.8
CM19G02290
Cyanidioschyzon merolae
1.5e-06
55.5
272
27.9
Pp3s155_50
Physcomitrella patens
1.5e-06
55.5
198
29.8
Naga_100001g49
Nannochloropsis gaditana
2.0e-06
55.1
117
29.9
Naga_100028g49
Nannochloropsis gaditana
7.6e-06
53.1
118
29.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (14 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (11 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing