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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0004G05670
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0004G05670
Aureococcus anophagefferens
7.4e-201
701.8
611
100.0
AA0002G00150
Aureococcus anophagefferens
1.8e-34
149.1
128
64.8
AA0023G00290
Aureococcus anophagefferens
1.9e-15
85.9
142
38.0
tho403400
Thalassiosira oceanica
4.6e-09
64.7
112
32.1
CC00G160610
Cyclotella cryptica
3.3e-07
58.5
80
35.0
CC00G160540
Cyclotella cryptica
5.6e-07
57.8
85
34.1
pte233670
Paramecium tetraurelia
1.6e-06
56.2
81
39.5
SPAC8C9.14
Schizosaccharomyces pombe
1.6e-06
56.2
81
38.3
gsu32730
Galdieria sulphuraria
2.1e-06
55.8
82
37.8
AT3G24520
Arabidopsis thaliana
2.8e-06
55.5
105
33.3
fso55360
Fistulifera solaris
2.8e-06
55.5
86
34.9
fso106560
Fistulifera solaris
2.8e-06
55.5
86
34.9
Pp3c11_20430
Physcomitrella patens
2.8e-06
55.5
109
32.1
Pp3c1_32480
Physcomitrella patens
2.8e-06
55.5
109
32.1
pte159980
Paramecium tetraurelia
3.6e-06
55.1
81
39.5
AT3G63350
Arabidopsis thaliana
6.2e-06
54.3
126
30.2
YHR206W
Saccharomyces cerevisiae strain S288C
8.1e-06
53.9
82
39.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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