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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0004G03900
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0004G03900
Aureococcus anophagefferens
6.1e-80
298.1
153
100.0
ccr44500
Chondrus crispus
4.6e-35
149.1
149
58.4
ccr192420
Chondrus crispus
1.5e-33
144.1
146
58.2
fso180070
Fistulifera solaris
1.5e-33
144.1
154
51.9
fso184670
Fistulifera solaris
2.5e-33
143.3
155
50.3
ps00G135660
Pseudo-nitzschia multiseries
2.4e-31
136.7
157
49.0
Ec-05_006200
Ectocarpus siliculosus
1.2e-30
134.4
152
48.7
ptri37680
Phaeodactylum tricornutum
1.5e-30
134.0
165
47.9
sya00G50090
Synedra acus
5.8e-30
132.1
167
46.1
Naga_100013g20
Nannochloropsis gaditana
1.3e-29
131.0
153
55.6
emh506070
Emiliania huxleyi
1.7e-29
130.6
132
53.8
gene18007
Fragilariopsis cylindrus
3.8e-29
129.4
158
50.0
gsu122670
Galdieria sulphuraria
6.4e-29
128.6
150
45.3
Sro1468_g275250
Seminavis robusta
8.4e-29
128.3
160
46.9
CC00G100940
Cyclotella cryptica
3.2e-28
126.3
174
45.4
tho217980
Thalassiosira oceanica
1.3e-26
120.9
163
44.2
tps172170
Thalassiosira pseudonana
2.5e-25
116.7
171
43.3
Pp3c9_12190
Physcomitrella patens
1.1e-23
111.3
159
44.0
Pp3s196_80
Physcomitrella patens
3.4e-22
106.3
146
42.5
emh27350
Emiliania huxleyi
1.4e-20
100.9
112
54.5
CM19G02530
Cyanidioschyzon merolae
4.2e-20
99.4
165
43.0
AT1G68720
Arabidopsis thaliana
7.1e-20
98.6
150
41.3
Cre13.g573300
Chlamydomonas reinhardtii
1.6e-19
97.4
112
56.2
sya00G54830
Synedra acus
6.0e-19
95.5
144
43.8
emh373890
Emiliania huxleyi
4.5e-14
79.3
149
39.6
emh735750
Emiliania huxleyi
7.7e-14
78.6
148
39.2
tps122490
Thalassiosira pseudonana
7.7e-14
78.6
153
36.6
ps00G196900
Pseudo-nitzschia multiseries
2.1e-11
70.5
162
36.4
FBgn0038491
Drosophila melanogaster
2.7e-11
70.1
144
35.4
gsu89480
Galdieria sulphuraria
6.1e-11
68.9
150
33.3
Ec-24_000690
Ectocarpus siliculosus
1.8e-10
67.4
154
32.5
sya00G240190
Synedra acus
3.0e-10
66.6
98
44.9
AA0004G03730
Aureococcus anophagefferens
2.0e-09
63.9
147
36.1
Naga_100062g10
Nannochloropsis gaditana
5.7e-09
62.4
168
31.5
ccr194240
Chondrus crispus
7.4e-09
62.0
156
34.0
WBGene00020052
Caenorhabditis elegans
9.7e-09
61.6
120
35.0
fso86960
Fistulifera solaris
9.7e-09
61.6
196
29.1
ENSG00000189007
Homo sapiens
3.7e-08
59.7
149
30.2
Pp3c23_8480
Physcomitrella patens
3.7e-08
59.7
92
41.3
fso153710
Fistulifera solaris
1.4e-07
57.8
194
27.8
Sro213_g088450
Seminavis robusta
1.8e-07
57.4
157
29.9
Pp3c14_6040
Physcomitrella patens
4.1e-07
56.2
125
32.8
WBGene00012968
Caenorhabditis elegans
5.3e-07
55.8
98
39.8
WBGene00010436
Caenorhabditis elegans
5.3e-07
55.8
140
30.0
Pp3s32_20
Physcomitrella patens
1.5e-06
54.3
80
38.8
Sro464_g148410
Seminavis robusta
1.5e-06
54.3
198
27.8
pte591440
Paramecium tetraurelia
2.0e-06
53.9
111
31.5
AT5G28050
Arabidopsis thaliana
4.5e-06
52.8
95
36.8
Sro2810_g337590
Seminavis robusta
4.5e-06
52.8
110
37.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing