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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0004G02200
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0004G02200
Aureococcus anophagefferens
5.1e-145
515.0
245
100.0
Ec-07_000790
Ectocarpus siliculosus
6.8e-73
275.4
241
52.3
ENSG00000125352
Homo sapiens
8.1e-50
198.7
236
42.8
FBgn0038772
Drosophila melanogaster
4.9e-47
189.5
245
40.0
Pp3c8_16180
Physcomitrella patens
1.0e-44
181.8
247
41.7
ENSG00000139797
Homo sapiens
1.3e-44
181.4
236
41.1
WBGene00010476
Caenorhabditis elegans
5.6e-43
176.0
231
40.3
Cre06.g254650
Chlamydomonas reinhardtii
2.1e-42
174.1
213
44.1
CC00G48720
Cyclotella cryptica
1.4e-41
171.4
167
46.1
tps224470
Thalassiosira pseudonana
1.8e-41
171.0
173
49.7
ptri138290
Phaeodactylum tricornutum
2.4e-41
170.6
197
42.1
AT1G01350
Arabidopsis thaliana
3.1e-41
170.2
240
38.3
AT5G06420
Arabidopsis thaliana
4.0e-41
169.9
240
38.3
ccr168880
Chondrus crispus
1.0e-39
165.2
161
46.6
emh763210
Emiliania huxleyi
5.5e-38
159.5
227
38.8
gsu94580
Galdieria sulphuraria
1.6e-37
157.9
158
45.6
ps00G155730
Pseudo-nitzschia multiseries
7.9e-37
155.6
165
44.8
Sro1_g001040
Seminavis robusta
1.0e-36
155.2
160
42.5
sya00G249390
Synedra acus
1.3e-36
154.8
155
45.2
Sro710_g191130
Seminavis robusta
4.3e-35
149.8
160
41.2
PSNMU-V1.4_AUG-EV-PASAV3_0035700
Pseudo-nitzschia multistriata
1.3e-34
148.3
171
41.5
gene12340
Fragilariopsis cylindrus
1.1e-33
145.2
185
39.5
fso47080
Fistulifera solaris
1.1e-33
145.2
154
44.8
fso76190
Fistulifera solaris
2.4e-33
144.1
154
44.8
YLR323C
Saccharomyces cerevisiae strain S288C
2.2e-31
137.5
150
42.7
pte113540
Paramecium tetraurelia
2.2e-26
120.9
157
39.5
SPBC13E7.02
Schizosaccharomyces pombe
2.8e-26
120.6
201
34.8
AT4G01023
Arabidopsis thaliana
2.4e-09
64.3
62
38.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing