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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G06540
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G06540
Aureococcus anophagefferens
4.8e-55
214.9
108
100.0
tho38320
Thalassiosira oceanica
1.2e-18
94.0
105
47.6
tps33260
Thalassiosira pseudonana
4.7e-18
92.0
111
47.7
AA0005G01990
Aureococcus anophagefferens
5.2e-17
88.6
107
44.9
tho368780
Thalassiosira oceanica
8.9e-17
87.8
111
46.8
CC00G11570
Cyclotella cryptica
2.6e-16
86.3
111
46.8
fso71400
Fistulifera solaris
3.4e-16
85.9
110
44.5
fso190180
Fistulifera solaris
4.4e-16
85.5
110
44.5
AA0012G00350
Aureococcus anophagefferens
5.8e-16
85.1
108
44.4
fso53830
Fistulifera solaris
5.8e-16
85.1
106
47.2
fso129470
Fistulifera solaris
1.3e-15
84.0
106
47.2
sya00G258880
Synedra acus
2.9e-15
82.8
104
44.2
ptri109240
Phaeodactylum tricornutum
3.7e-15
82.4
110
41.8
Ec-03_001810
Ectocarpus siliculosus
4.9e-15
82.0
106
42.5
Naga_100017g70
Nannochloropsis gaditana
6.4e-15
81.6
105
43.8
ptri229970
Phaeodactylum tricornutum
8.3e-15
81.3
105
42.9
Sro174_g076640
Seminavis robusta
8.3e-15
81.3
106
43.4
PSNMU-V1.4_AUG-EV-PASAV3_0016650
Pseudo-nitzschia multistriata
1.9e-14
80.1
112
42.9
Sro126_g060630
Seminavis robusta
2.4e-14
79.7
104
42.3
fso99600
Fistulifera solaris
3.2e-14
79.3
109
43.1
gsu103970
Galdieria sulphuraria
3.2e-14
79.3
106
42.5
CM04G00770
Cyanidioschyzon merolae
5.4e-14
78.6
107
43.0
CM09G00420
Cyanidioschyzon merolae
5.4e-14
78.6
107
43.0
ps00G08000
Pseudo-nitzschia multiseries
5.4e-14
78.6
109
41.3
Ec-18_004570
Ectocarpus siliculosus
7.1e-14
78.2
105
41.0
fso64260
Fistulifera solaris
1.2e-13
77.4
109
42.2
emh490140
Emiliania huxleyi
2.1e-13
76.6
100
39.0
Pp3c25_15060
Physcomitrella patens
2.1e-13
76.6
108
47.2
AT3G59980
Arabidopsis thaliana
2.7e-13
76.3
107
45.8
Sro625_g177520
Seminavis robusta
2.7e-13
76.3
111
40.5
CC00G49800
Cyclotella cryptica
3.5e-13
75.9
104
44.2
Cre02.g087950
Chlamydomonas reinhardtii
4.6e-13
75.5
106
41.5
PSNMU-V1.4_AUG-EV-PASAV3_0031310
Pseudo-nitzschia multistriata
6.0e-13
75.1
111
39.6
gene13698
Fragilariopsis cylindrus
1.7e-12
73.6
104
41.3
PSNMU-V1.4_AUG-EV-PASAV3_0050130
Pseudo-nitzschia multistriata
2.3e-12
73.2
104
43.3
gene678
Fragilariopsis cylindrus
3.0e-12
72.8
110
40.9
ps00G12920
Pseudo-nitzschia multiseries
3.0e-12
72.8
104
43.3
CC00G146110
Cyclotella cryptica
3.9e-12
72.4
106
42.5
tho161400
Thalassiosira oceanica
5.1e-12
72.0
105
41.0
tps84810
Thalassiosira pseudonana
6.6e-12
71.6
104
42.3
emh613500
Emiliania huxleyi
8.6e-12
71.2
111
36.0
emh427310
Emiliania huxleyi
8.6e-12
71.2
106
45.3
PSNMU-V1.4_AUG-EV-PASAV3_0082870
Pseudo-nitzschia multistriata
1.1e-11
70.9
106
38.7
ps00G106110
Pseudo-nitzschia multiseries
1.5e-11
70.5
105
39.0
Sro20_g014070
Seminavis robusta
1.5e-11
70.5
101
42.6
tps01320
Thalassiosira pseudonana
1.5e-11
70.5
105
41.9
AA0016G00770
Aureococcus anophagefferens
2.5e-11
69.7
109
38.5
fso35220
Fistulifera solaris
3.3e-11
69.3
105
40.0
Ec-09_002760
Ectocarpus siliculosus
7.3e-11
68.2
109
39.4
gene18232
Fragilariopsis cylindrus
7.3e-11
68.2
101
42.6
gene1306
Fragilariopsis cylindrus
7.3e-11
68.2
108
39.8
fso29000
Fistulifera solaris
7.3e-11
68.2
105
41.0
Naga_100028g2
Nannochloropsis gaditana
1.2e-10
67.4
102
37.3
gene9950
Fragilariopsis cylindrus
1.6e-10
67.0
77
42.9
PSNMU-V1.4_AUG-EV-PASAV3_0099320
Pseudo-nitzschia multistriata
1.6e-10
67.0
101
40.6
Cre01.g046652
Chlamydomonas reinhardtii
2.1e-10
66.6
104
38.5
AA0014G01570
Aureococcus anophagefferens
2.8e-10
66.2
106
38.7
Sro110_g054990
Seminavis robusta
2.8e-10
66.2
103
38.8
gsu100370
Galdieria sulphuraria
3.6e-10
65.9
105
39.0
gsu100390
Galdieria sulphuraria
3.6e-10
65.9
105
39.0
Naga_100004g19
Nannochloropsis gaditana
3.6e-10
65.9
107
39.3
ptri18330
Phaeodactylum tricornutum
3.6e-10
65.9
107
39.3
Cre08.g364650
Chlamydomonas reinhardtii
4.7e-10
65.5
102
39.2
ptri176990
Phaeodactylum tricornutum
6.2e-10
65.1
104
40.4
sya00G221550
Synedra acus
6.2e-10
65.1
78
41.0
CC00G119710
Cyclotella cryptica
8.1e-10
64.7
106
36.8
fso39700
Fistulifera solaris
8.1e-10
64.7
99
39.4
fso109630
Fistulifera solaris
1.1e-09
64.3
99
39.4
CC00G36090
Cyclotella cryptica
1.8e-09
63.5
117
35.0
sya00G80910
Synedra acus
1.8e-09
63.5
83
38.6
ps00G84740
Pseudo-nitzschia multiseries
2.3e-09
63.2
101
39.6
tps09680
Thalassiosira pseudonana
2.3e-09
63.2
107
37.4
ptri157070
Phaeodactylum tricornutum
6.8e-09
61.6
101
39.6
ENSG00000134684
Homo sapiens
8.9e-09
61.2
80
41.2
SPAC30C2.04
Schizosaccharomyces pombe
8.9e-09
61.2
105
34.3
sya00G56360
Synedra acus
1.2e-08
60.8
107
36.4
FBgn0033351
Drosophila melanogaster
4.4e-08
58.9
106
34.0
YGL105W
Saccharomyces cerevisiae strain S288C
7.6e-08
58.2
107
34.6
Pp3c15_24000
Physcomitrella patens
9.9e-08
57.8
104
32.7
pte272170
Paramecium tetraurelia
2.9e-07
56.2
104
37.5
sya00G196850
Synedra acus
3.7e-07
55.8
107
32.7
FBgn0027080
Drosophila melanogaster
4.9e-07
55.5
105
35.2
ps00G189580
Pseudo-nitzschia multiseries
1.1e-06
54.3
108
32.4
PSNMU-V1.4_AUG-EV-PASAV3_0018750
Pseudo-nitzschia multistriata
2.4e-06
53.1
108
31.5
ptri04920
Phaeodactylum tricornutum
3.2e-06
52.8
114
34.2
Cre07.g326950
Chlamydomonas reinhardtii
5.4e-06
52.0
102
38.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (5 genes)
Synedra acus (5 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing