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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G05080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G05080
Aureococcus anophagefferens
0.0e+00
3592.0
2032
100.0
emh660930
Emiliania huxleyi
8.2e-55
218.4
360
43.3
AA0004G03510
Aureococcus anophagefferens
4.8e-47
192.6
896
28.5
AT1G20720
Arabidopsis thaliana
1.4e-41
174.5
943
24.4
Pp3c10_650
Physcomitrella patens
1.2e-40
171.4
957
23.6
gsu66130
Galdieria sulphuraria
1.5e-40
171.0
936
23.1
Cre02.g089608
Chlamydomonas reinhardtii
7.0e-38
162.2
996
23.9
ptri51210
Phaeodactylum tricornutum
2.0e-37
160.6
289
37.0
ENSG00000258366
Homo sapiens
2.7e-37
160.2
887
23.2
ENSG00000026036
Homo sapiens
2.7e-37
160.2
887
23.2
gene470
Fragilariopsis cylindrus
5.9e-37
159.1
931
25.2
FBgn0029798
Drosophila melanogaster
5.0e-36
156.0
966
23.7
PSNMU-V1.4_AUG-EV-PASAV3_0122860
Pseudo-nitzschia multistriata
8.5e-36
155.2
303
38.9
Ec-17_004010
Ectocarpus siliculosus
1.1e-35
154.8
899
27.1
ccr189620
Chondrus crispus
1.5e-35
154.5
884
24.3
ps00G72140
Pseudo-nitzschia multiseries
2.5e-35
153.7
279
37.3
Sro2061_g312950
Seminavis robusta
5.5e-35
152.5
313
36.4
fso189940
Fistulifera solaris
1.2e-34
151.4
926
24.2
Pp3c18_12550
Physcomitrella patens
6.1e-34
149.1
1057
23.5
CM17G02610
Cyanidioschyzon merolae
8.0e-34
148.7
953
23.5
WBGene00009124
Caenorhabditis elegans
2.6e-32
143.7
880
23.1
tps119140
Thalassiosira pseudonana
2.6e-32
143.7
902
24.1
ps00G19550
Pseudo-nitzschia multiseries
5.7e-32
142.5
953
23.0
ccr98900
Chondrus crispus
7.5e-32
142.1
780
23.7
emh723940
Emiliania huxleyi
1.3e-31
141.4
869
25.0
AT1G79950
Arabidopsis thaliana
2.8e-31
140.2
979
23.6
Naga_100006g14
Nannochloropsis gaditana
3.7e-31
139.8
928
24.9
tho79160
Thalassiosira oceanica
2.4e-30
137.1
334
32.6
ptri229270
Phaeodactylum tricornutum
4.1e-30
136.3
917
22.8
pte466490
Paramecium tetraurelia
5.4e-30
136.0
872
20.9
pte549590
Paramecium tetraurelia
1.2e-29
134.8
874
20.8
pte586060
Paramecium tetraurelia
1.0e-28
131.7
863
21.0
gsu42250
Galdieria sulphuraria
1.7e-28
131.0
894
22.3
WBGene00001049
Caenorhabditis elegans
2.9e-28
130.2
984
20.3
PSNMU-V1.4_AUG-EV-PASAV3_0029670
Pseudo-nitzschia multistriata
5.0e-28
129.4
963
22.6
Sro1149_g246570
Seminavis robusta
1.9e-27
127.5
978
23.5
Cre09.g397350
Chlamydomonas reinhardtii
1.2e-26
124.8
307
32.6
AT1G20750
Arabidopsis thaliana
2.1e-26
124.0
305
32.5
tho199420
Thalassiosira oceanica
3.6e-26
123.2
977
23.1
sya00G144630
Synedra acus
6.1e-26
122.5
880
22.8
fso167760
Fistulifera solaris
1.0e-25
121.7
320
29.4
fso82870
Fistulifera solaris
2.0e-24
117.5
307
32.9
ENSG00000136492
Homo sapiens
2.0e-24
117.5
211
36.0
CC00G32620
Cyclotella cryptica
1.1e-22
111.7
910
22.4
CC00G68200
Cyclotella cryptica
2.4e-22
110.5
811
22.4
tps107580
Thalassiosira pseudonana
2.4e-22
110.5
780
22.8
tho130680
Thalassiosira oceanica
4.1e-22
109.8
342
28.1
Sro2483_g328910
Seminavis robusta
7.0e-22
109.0
243
35.8
Sro2404_g326440
Seminavis robusta
4.6e-21
106.3
280
35.4
fso47560
Fistulifera solaris
1.3e-20
104.8
294
31.3
ccr80480
Chondrus crispus
1.7e-20
104.4
194
37.1
WBGene00010839
Caenorhabditis elegans
1.7e-20
104.4
206
32.5
fso20440
Fistulifera solaris
2.9e-20
103.6
335
30.1
fso42270
Fistulifera solaris
3.9e-20
103.2
335
30.7
sya00G206890
Synedra acus
3.9e-20
103.2
212
34.9
CM04G01290
Cyanidioschyzon merolae
1.9e-19
100.9
949
22.0
ptri196830
Phaeodactylum tricornutum
1.9e-19
100.9
777
22.5
Ec-12_007720
Ectocarpus siliculosus
3.3e-19
100.1
184
38.0
Naga_100022g7
Nannochloropsis gaditana
3.3e-19
100.1
338
26.9
SPAC1D4.12
Schizosaccharomyces pombe
4.3e-19
99.8
871
21.9
Naga_100015g50
Nannochloropsis gaditana
5.6e-19
99.4
866
20.8
SPAC3G6.11
Schizosaccharomyces pombe
5.6e-19
99.4
206
30.1
AT1G79890
Arabidopsis thaliana
9.5e-19
98.6
245
28.2
gene15902
Fragilariopsis cylindrus
1.6e-18
97.8
350
26.6
sya00G155290
Synedra acus
2.8e-18
97.1
314
29.3
CM16G00660
Cyanidioschyzon merolae
4.7e-18
96.3
842
22.8
pte475920
Paramecium tetraurelia
4.7e-18
96.3
871
19.1
CM09G01510
Cyanidioschyzon merolae
1.0e-17
95.1
854
21.8
ccr164080
Chondrus crispus
1.8e-17
94.4
184
34.8
CM18G04230
Cyanidioschyzon merolae
1.8e-17
94.4
227
32.2
Ec-15_001630
Ectocarpus siliculosus
3.1e-17
93.6
234
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0014370
Pseudo-nitzschia multistriata
3.1e-17
93.6
387
28.4
CC00G78970
Cyclotella cryptica
4.0e-17
93.2
1054
21.6
ENSG00000104884
Homo sapiens
4.0e-17
93.2
828
21.9
tps150390
Thalassiosira pseudonana
5.2e-17
92.8
841
20.3
ps00G02920
Pseudo-nitzschia multiseries
1.2e-16
91.7
843
20.9
PSNMU-V1.4_AUG-EV-PASAV3_0053890
Pseudo-nitzschia multistriata
5.8e-16
89.4
190
32.1
tps163530
Thalassiosira pseudonana
5.8e-16
89.4
1045
20.6
AA0001G02050
Aureococcus anophagefferens
1.3e-15
88.2
852
23.8
Pp3c10_16570
Physcomitrella patens
1.3e-15
88.2
870
20.3
gsu70010
Galdieria sulphuraria
2.2e-15
87.4
312
27.9
PSNMU-V1.4_AUG-EV-PASAV3_0097760
Pseudo-nitzschia multistriata
2.9e-15
87.0
188
31.4
YER171W
Saccharomyces cerevisiae strain S288C
4.9e-15
86.3
839
19.8
tho91380
Thalassiosira oceanica
4.9e-15
86.3
214
32.2
ccr79360
Chondrus crispus
6.4e-15
85.9
180
31.7
ps00G16370
Pseudo-nitzschia multiseries
8.3e-15
85.5
323
26.6
Sro25_g017070
Seminavis robusta
8.3e-15
85.5
236
30.5
FBgn0026876
Drosophila melanogaster
1.1e-14
85.1
211
29.4
Cre17.g706300
Chlamydomonas reinhardtii
1.4e-14
84.7
174
31.6
YPL008W
Saccharomyces cerevisiae strain S288C
1.4e-14
84.7
201
28.4
gene13106
Fragilariopsis cylindrus
1.9e-14
84.3
189
31.2
fso02730
Fistulifera solaris
1.9e-14
84.3
180
31.1
fso63230
Fistulifera solaris
1.9e-14
84.3
180
31.1
Pp3c9_5880
Physcomitrella patens
2.4e-14
84.0
256
27.7
FBgn0261850
Drosophila melanogaster
3.2e-14
83.6
832
19.8
pte90750
Paramecium tetraurelia
4.1e-14
83.2
827
19.0
AT1G03190
Arabidopsis thaliana
5.4e-14
82.8
877
21.6
WBGene00021752
Caenorhabditis elegans
7.0e-14
82.4
201
30.8
sya00G110440
Synedra acus
9.2e-14
82.0
169
32.0
emh677180
Emiliania huxleyi
1.6e-13
81.3
174
32.2
PSNMU-V1.4_AUG-EV-PASAV3_0020690
Pseudo-nitzschia multistriata
1.6e-13
81.3
175
31.4
CC00G124350
Cyclotella cryptica
4.6e-13
79.7
160
31.2
ps00G149200
Pseudo-nitzschia multiseries
6.0e-13
79.3
239
28.5
gene3502
Fragilariopsis cylindrus
7.8e-13
79.0
834
21.5
gene17559
Fragilariopsis cylindrus
7.8e-13
79.0
834
21.5
pte65510
Paramecium tetraurelia
7.8e-13
79.0
260
25.8
Ec-19_001310
Ectocarpus siliculosus
1.0e-12
78.6
834
21.9
Sro1660_g289290
Seminavis robusta
1.3e-12
78.2
246
27.6
gsu38030
Galdieria sulphuraria
1.7e-12
77.8
819
20.9
ptri197690
Phaeodactylum tricornutum
3.9e-12
76.6
235
28.1
pte786060
Paramecium tetraurelia
5.0e-12
76.3
176
30.1
Sro13_g010240
Seminavis robusta
6.6e-12
75.9
819
21.7
gsu69250
Galdieria sulphuraria
8.6e-12
75.5
240
25.8
CC00G94310
Cyclotella cryptica
1.1e-11
75.1
350
26.6
tho112600
Thalassiosira oceanica
2.5e-11
73.9
147
32.0
emh401760
Emiliania huxleyi
5.6e-11
72.8
219
27.9
Ec-21_004480
Ectocarpus siliculosus
8.1e-10
68.9
108
41.7
Ec-21_004470
Ectocarpus siliculosus
8.1e-10
68.9
108
41.7
PSNMU-V1.4_AUG-EV-PASAV3_0092480
Pseudo-nitzschia multistriata
1.1e-09
68.6
181
27.6
pte636530
Paramecium tetraurelia
5.2e-09
66.2
125
29.6
Sro712_g191420
Seminavis robusta
6.8e-09
65.9
213
28.2
gene18703
Fragilariopsis cylindrus
8.9e-09
65.5
188
31.4
tps70280
Thalassiosira pseudonana
2.0e-08
64.3
309
24.3
emh73460
Emiliania huxleyi
2.6e-08
63.9
209
28.2
PSNMU-V1.4_AUG-EV-PASAV3_0097770
Pseudo-nitzschia multistriata
3.4e-08
63.5
147
29.3
ENSG00000013573
Homo sapiens
2.2e-07
60.8
118
32.2
tho34560
Thalassiosira oceanica
1.4e-06
58.2
171
26.9
Cre07.g322300
Chlamydomonas reinhardtii
9.2e-06
55.5
370
22.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (5 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (8 genes)
Seminavis robusta (8 genes)
Synedra acus (4 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (8 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing