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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G04180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G04180
Aureococcus anophagefferens
2.3e-297
1022.7
758
100.0
AA0007G03290
Aureococcus anophagefferens
4.6e-11
71.6
74
50.0
CM13G01510
Cyanidioschyzon merolae
7.9e-11
70.9
125
34.4
ccr100380
Chondrus crispus
2.3e-10
69.3
125
35.2
Naga_100018g16
Nannochloropsis gaditana
3.0e-10
68.9
103
40.8
gsu62910
Galdieria sulphuraria
1.9e-09
66.2
113
37.2
Pp3c1_860
Physcomitrella patens
8.2e-08
60.8
60
46.7
Pp3c5_19640
Physcomitrella patens
1.4e-07
60.1
51
49.0
emh614360
Emiliania huxleyi
1.8e-07
59.7
99
38.4
emh571680
Emiliania huxleyi
1.8e-07
59.7
99
38.4
fso34130
Fistulifera solaris
1.8e-07
59.7
96
32.3
Pp3c6_8120
Physcomitrella patens
1.8e-07
59.7
60
45.0
ptri114000
Phaeodactylum tricornutum
1.8e-07
59.7
96
34.4
Ec-06_008460
Ectocarpus siliculosus
3.1e-07
58.9
57
42.1
SPCC126.07c
Schizosaccharomyces pombe
4.1e-07
58.5
125
28.8
AT5G58610
Arabidopsis thaliana
5.3e-07
58.2
47
53.2
AA0004G01410
Aureococcus anophagefferens
6.9e-07
57.8
138
27.5
gene15400
Fragilariopsis cylindrus
6.9e-07
57.8
120
30.8
AA0021G01150
Aureococcus anophagefferens
9.0e-07
57.4
102
39.2
Cre08.g358543
Chlamydomonas reinhardtii
9.0e-07
57.4
55
43.6
Cre10.g446600
Chlamydomonas reinhardtii
9.0e-07
57.4
55
43.6
Cre17.g733450
Chlamydomonas reinhardtii
9.0e-07
57.4
55
43.6
fso186490
Fistulifera solaris
1.2e-06
57.0
96
31.2
Pp3c2_35750
Physcomitrella patens
1.2e-06
57.0
58
44.8
Sro108_g054350
Seminavis robusta
1.2e-06
57.0
125
28.8
tps115040
Thalassiosira pseudonana
1.2e-06
57.0
99
32.3
CC00G95280
Cyclotella cryptica
1.5e-06
56.6
99
32.3
ENSG00000117139
Homo sapiens
2.0e-06
56.2
61
42.6
ps00G136730
Pseudo-nitzschia multiseries
2.0e-06
56.2
49
49.0
pte164870
Paramecium tetraurelia
2.0e-06
56.2
123
30.1
pte492110
Paramecium tetraurelia
2.0e-06
56.2
123
29.3
pte497400
Paramecium tetraurelia
2.0e-06
56.2
123
30.1
pte644820
Paramecium tetraurelia
2.0e-06
56.2
123
29.3
AT1G05380
Arabidopsis thaliana
2.6e-06
55.8
47
46.8
Ec-01_002610
Ectocarpus siliculosus
2.6e-06
55.8
55
49.1
gsu111690
Galdieria sulphuraria
2.6e-06
55.8
59
47.5
AA0008G01260
Aureococcus anophagefferens
3.4e-06
55.5
99
35.4
gene10211
Fragilariopsis cylindrus
4.5e-06
55.1
49
49.0
PSNMU-V1.4_AUG-EV-PASAV3_0110000
Pseudo-nitzschia multistriata
4.5e-06
55.1
120
29.2
ptri232150
Phaeodactylum tricornutum
4.5e-06
55.1
54
48.1
ENSG00000073614
Homo sapiens
5.9e-06
54.7
61
42.6
ps00G93850
Pseudo-nitzschia multiseries
5.9e-06
54.7
120
29.2
CM05G01420
Cyanidioschyzon merolae
7.7e-06
54.3
58
46.6
Cre06.g256200
Chlamydomonas reinhardtii
7.7e-06
54.3
123
30.1
PSNMU-V1.4_AUG-EV-PASAV3_0097200
Pseudo-nitzschia multistriata
7.7e-06
54.3
49
46.9
sya00G06640
Synedra acus
7.7e-06
54.3
50
44.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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