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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G01790
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G01790
Aureococcus anophagefferens
0.0e+00
1917.9
1131
100.0
emh517250
Emiliania huxleyi
2.1e-20
103.2
73
58.9
Naga_101270g2
Nannochloropsis gaditana
8.4e-17
91.3
133
37.6
Naga_100247g8
Nannochloropsis gaditana
1.1e-16
90.9
249
28.1
Sro62_g035360
Seminavis robusta
2.5e-16
89.7
90
47.8
AT3G27710
Arabidopsis thaliana
6.7e-14
81.6
200
31.0
PSNMU-V1.4_AUG-EV-PASAV3_0043890
Pseudo-nitzschia multistriata
8.7e-14
81.3
236
30.5
AT2G31760
Arabidopsis thaliana
1.1e-13
80.9
198
30.8
Ec-01_005320
Ectocarpus siliculosus
5.7e-13
78.6
251
29.9
gene11087
Fragilariopsis cylindrus
3.7e-12
75.9
79
49.4
Sro2627_g332970
Seminavis robusta
1.8e-11
73.6
286
26.6
ps00G36530
Pseudo-nitzschia multiseries
4.1e-11
72.4
232
31.0
pte109460
Paramecium tetraurelia
4.5e-10
68.9
264
26.1
AT2G31780
Arabidopsis thaliana
1.0e-09
67.8
200
29.0
gene87
Fragilariopsis cylindrus
2.5e-08
63.2
205
30.2
pte124410
Paramecium tetraurelia
5.5e-08
62.0
201
27.4
pte661140
Paramecium tetraurelia
5.5e-08
62.0
192
27.1
gene9072
Fragilariopsis cylindrus
9.3e-08
61.2
205
29.8
Naga_100284g3
Nannochloropsis gaditana
3.6e-07
59.3
187
30.5
AT3G27720
Arabidopsis thaliana
3.0e-06
56.2
134
32.8
Sro168_g074770
Seminavis robusta
6.7e-06
55.1
208
25.0
pte152430
Paramecium tetraurelia
8.7e-06
54.7
186
27.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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