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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0001G06430
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0001G06430
Aureococcus anophagefferens
0.0e+00
3567.7
1807
100.0
Ec-19_001480
Ectocarpus siliculosus
3.2e-143
511.9
845
38.2
Naga_100004g161
Nannochloropsis gaditana
9.3e-143
510.4
875
36.8
CC00G122990
Cyclotella cryptica
5.1e-141
504.6
876
37.8
Sro814_g206290
Seminavis robusta
7.6e-137
490.7
885
37.2
ptri105920
Phaeodactylum tricornutum
7.1e-135
484.2
878
37.6
tps165760
Thalassiosira pseudonana
2.5e-132
475.7
857
36.6
CM14G02620
Cyanidioschyzon merolae
3.8e-128
461.8
898
34.5
sya00G220580
Synedra acus
1.9e-111
406.4
1071
31.7
Pp3c1_7590
Physcomitrella patens
2.4e-106
389.4
843
33.5
Pp3c2_33410
Physcomitrella patens
4.1e-106
388.7
856
32.9
Cre10.g433050
Chlamydomonas reinhardtii
8.0e-102
374.4
873
31.7
AT3G19720
Arabidopsis thaliana
9.7e-100
367.5
846
31.3
Pp3c2_33000
Physcomitrella patens
9.7e-100
367.5
864
32.9
tho226060
Thalassiosira oceanica
1.4e-90
337.0
445
43.1
emh734350
Emiliania huxleyi
3.3e-79
299.3
622
33.8
AA0004G01900
Aureococcus anophagefferens
3.0e-48
196.4
379
33.5
emh748410
Emiliania huxleyi
3.3e-47
193.0
897
24.4
Cre12.g529450
Chlamydomonas reinhardtii
1.9e-34
150.6
735
24.6
tho610720
Thalassiosira oceanica
6.9e-29
132.1
114
57.9
AA0009G00790
Aureococcus anophagefferens
8.4e-27
125.2
443
25.7
AT1G53140
Arabidopsis thaliana
1.2e-25
121.3
456
24.8
Pp3c13_12110
Physcomitrella patens
1.2e-25
121.3
455
26.2
AA0004G01000
Aureococcus anophagefferens
3.9e-24
116.3
356
26.7
Pp3c17_9580
Physcomitrella patens
2.0e-20
104.0
267
29.6
AA0008G01690
Aureococcus anophagefferens
1.7e-19
100.9
349
24.9
AA0003G05060
Aureococcus anophagefferens
9.3e-18
95.1
491
25.9
tho226040
Thalassiosira oceanica
4.5e-12
76.3
189
31.2
tps180030
Thalassiosira pseudonana
5.9e-12
75.9
238
29.0
ccr190860
Chondrus crispus
7.7e-12
75.5
266
24.8
pte516800
Paramecium tetraurelia
2.2e-11
73.9
227
27.3
emh420860
Emiliania huxleyi
2.9e-11
73.6
212
30.7
emh361460
Emiliania huxleyi
2.9e-11
73.6
212
30.7
FBgn0026479
Drosophila melanogaster
3.8e-11
73.2
253
26.5
AA0005G02180
Aureococcus anophagefferens
5.0e-11
72.8
258
30.6
Naga_100057g19
Nannochloropsis gaditana
5.0e-11
72.8
247
30.8
sya00G05560
Synedra acus
5.0e-11
72.8
239
29.7
Cre05.g245950
Chlamydomonas reinhardtii
8.5e-11
72.0
241
29.9
Pp3c22_2500
Physcomitrella patens
1.1e-10
71.6
241
28.2
AT1G14830
Arabidopsis thaliana
1.9e-10
70.9
237
27.8
pte413660
Paramecium tetraurelia
2.5e-10
70.5
212
28.3
pte707020
Paramecium tetraurelia
2.5e-10
70.5
212
28.3
ptri97450
Phaeodactylum tricornutum
3.2e-10
70.1
240
30.0
CM05G00190
Cyanidioschyzon merolae
4.2e-10
69.7
279
27.2
ENSG00000087470
Homo sapiens
9.4e-10
68.6
261
26.4
Sro518_g158900
Seminavis robusta
9.4e-10
68.6
232
28.4
FBgn0003392
Drosophila melanogaster
1.2e-09
68.2
232
27.2
Pp3c20_4300
Physcomitrella patens
1.2e-09
68.2
253
26.1
fso58580
Fistulifera solaris
2.1e-09
67.4
218
27.1
Pp3c22_1100
Physcomitrella patens
2.1e-09
67.4
211
28.9
Pp3c19_4870
Physcomitrella patens
2.1e-09
67.4
211
28.9
Pp3c18_20531
Physcomitrella patens
2.1e-09
67.4
240
27.5
Pp3c18_20530
Physcomitrella patens
2.1e-09
67.4
240
27.5
Pp3c23_18740
Physcomitrella patens
2.7e-09
67.0
232
27.2
Pp3c8_23990
Physcomitrella patens
2.7e-09
67.0
286
26.9
pte671050
Paramecium tetraurelia
2.7e-09
67.0
212
27.8
fso145010
Fistulifera solaris
4.6e-09
66.2
218
26.6
Pp3c19_3590
Physcomitrella patens
6.1e-09
65.9
240
27.5
Cre17.g724150
Chlamydomonas reinhardtii
7.9e-09
65.5
233
30.5
CC00G121760
Cyclotella cryptica
1.0e-08
65.1
172
27.3
pte117550
Paramecium tetraurelia
1.0e-08
65.1
227
26.0
AT3G60190
Arabidopsis thaliana
1.4e-08
64.7
214
27.6
YKR001C
Saccharomyces cerevisiae strain S288C
1.4e-08
64.7
275
24.7
AT4G33650
Arabidopsis thaliana
1.8e-08
64.3
214
28.0
WBGene00001093
Caenorhabditis elegans
1.8e-08
64.3
236
28.0
ENSG00000106976
Homo sapiens
1.8e-08
64.3
253
27.3
WBGene00001130
Caenorhabditis elegans
2.3e-08
63.9
253
28.1
ENSG00000197959
Homo sapiens
2.3e-08
63.9
232
26.3
ENSG00000079805
Homo sapiens
2.3e-08
63.9
232
25.9
PSNMU-V1.4_AUG-EV-PASAV3_0065870
Pseudo-nitzschia multistriata
2.3e-08
63.9
238
27.3
YLL001W
Saccharomyces cerevisiae strain S288C
3.9e-08
63.2
262
26.0
SPAC767.01c
Schizosaccharomyces pombe
3.9e-08
63.2
243
27.6
ps00G185470
Pseudo-nitzschia multiseries
6.7e-08
62.4
237
27.8
AT2G44590
Arabidopsis thaliana
1.1e-07
61.6
217
26.7
emh313340
Emiliania huxleyi
1.1e-07
61.6
222
28.8
Sro107_g053890
Seminavis robusta
3.3e-07
60.1
149
28.9
AT2G14120
Arabidopsis thaliana
4.3e-07
59.7
236
25.8
tps63440
Thalassiosira pseudonana
4.3e-07
59.7
170
27.1
CC00G151420
Cyclotella cryptica
7.4e-07
58.9
249
25.7
gsu93030
Galdieria sulphuraria
7.4e-07
58.9
251
26.7
ENSG00000154359
Homo sapiens
7.4e-07
58.9
84
39.3
Pp3c23_1630
Physcomitrella patens
7.4e-07
58.9
232
25.4
pte138500
Paramecium tetraurelia
7.4e-07
58.9
214
25.7
AT5G42080
Arabidopsis thaliana
9.7e-07
58.5
211
25.6
Ec-19_001490
Ectocarpus siliculosus
9.7e-07
58.5
76
42.1
emh71220
Emiliania huxleyi
1.3e-06
58.2
272
27.9
AT3G61760
Arabidopsis thaliana
1.7e-06
57.8
210
25.7
WBGene00001134
Caenorhabditis elegans
1.7e-06
57.8
235
25.1
AA0001G07030
Aureococcus anophagefferens
2.8e-06
57.0
231
28.1
Ec-04_003910
Ectocarpus siliculosus
2.8e-06
57.0
76
40.8
Ec-14_003520
Ectocarpus siliculosus
2.8e-06
57.0
81
38.3
gene7258
Fragilariopsis cylindrus
2.8e-06
57.0
222
26.6
SPBC1718.06
Schizosaccharomyces pombe
2.8e-06
57.0
127
30.7
pte77910
Paramecium tetraurelia
3.7e-06
56.6
214
25.2
emh298020
Emiliania huxleyi
8.2e-06
55.5
230
28.7
ENSG00000101695
Homo sapiens
8.2e-06
55.5
52
48.1
ENSG00000170500
Homo sapiens
8.2e-06
55.5
81
35.8
Pp3c3_20850
Physcomitrella patens
8.2e-06
55.5
66
37.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (8 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (16 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing