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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0001G05650
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0001G05650
Aureococcus anophagefferens
0.0e+00
1558.9
958
100.0
emh264130
Emiliania huxleyi
1.5e-14
83.6
244
31.6
emh559500
Emiliania huxleyi
8.2e-13
77.8
90
45.6
Cre12.g517850
Chlamydomonas reinhardtii
4.1e-12
75.5
126
36.5
emh234870
Emiliania huxleyi
5.5e-09
65.1
161
34.8
Sro364_g127030
Seminavis robusta
1.6e-08
63.5
73
43.8
Naga_100008g49
Nannochloropsis gaditana
2.7e-08
62.8
66
40.9
Sro281_g107280
Seminavis robusta
3.6e-08
62.4
65
41.5
Sro2062_g313040
Seminavis robusta
7.9e-08
61.2
83
38.6
Cre12.g517800
Chlamydomonas reinhardtii
1.4e-07
60.5
82
37.8
fso86310
Fistulifera solaris
2.3e-07
59.7
65
38.5
ps00G172810
Pseudo-nitzschia multiseries
3.0e-07
59.3
65
40.0
pte391610
Paramecium tetraurelia
3.0e-07
59.3
66
37.9
ptri127180
Phaeodactylum tricornutum
3.0e-07
59.3
86
37.2
WBGene00013273
Caenorhabditis elegans
6.7e-07
58.2
113
36.3
pte743420
Paramecium tetraurelia
6.7e-07
58.2
67
40.3
pte765930
Paramecium tetraurelia
8.8e-07
57.8
67
37.3
gene16872
Fragilariopsis cylindrus
1.1e-06
57.4
65
38.5
tps120590
Thalassiosira pseudonana
1.1e-06
57.4
63
39.7
pte654870
Paramecium tetraurelia
1.5e-06
57.0
36
58.3
WBGene00016903
Caenorhabditis elegans
2.5e-06
56.2
63
42.9
pte461900
Paramecium tetraurelia
2.5e-06
56.2
36
58.3
pte347660
Paramecium tetraurelia
3.3e-06
55.8
67
35.8
fso108990
Fistulifera solaris
7.4e-06
54.7
103
33.0
pte183540
Paramecium tetraurelia
7.4e-06
54.7
71
33.8
pte697130
Paramecium tetraurelia
7.4e-06
54.7
36
52.8
pte120290
Paramecium tetraurelia
9.7e-06
54.3
50
40.0
pte530050
Paramecium tetraurelia
9.7e-06
54.3
36
55.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (3 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing