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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0001G03960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0001G03960
Aureococcus anophagefferens
0.0e+00
1508.8
815
100.0
CC00G29640
Cyclotella cryptica
5.9e-26
121.3
260
31.5
CC00G55620
Cyclotella cryptica
6.5e-25
117.9
261
31.8
Sro74_g040930
Seminavis robusta
8.5e-25
117.5
251
32.7
CC00G36820
Cyclotella cryptica
4.0e-22
108.6
209
32.1
CC00G100480
Cyclotella cryptica
4.8e-20
101.7
313
28.8
CC00G59400
Cyclotella cryptica
1.1e-19
100.5
241
30.7
AT1G56550
Arabidopsis thaliana
7.0e-19
97.8
277
28.9
AT4G01220
Arabidopsis thaliana
2.7e-18
95.9
258
28.3
Pp3c18_10930
Physcomitrella patens
5.0e-17
91.7
254
27.6
AT4G01750
Arabidopsis thaliana
1.9e-16
89.7
283
26.5
AT4G01770
Arabidopsis thaliana
2.8e-15
85.9
272
26.1
AA0007G00800
Aureococcus anophagefferens
1.2e-13
80.5
287
26.5
Ec-12_003620
Ectocarpus siliculosus
4.0e-06
55.5
258
25.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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