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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0001G01490
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0001G01490
Aureococcus anophagefferens
3.6e-38
158.3
73
100.0
sya00G157700
Synedra acus
4.6e-25
114.8
73
64.4
Sro13_g009840
Seminavis robusta
1.8e-21
102.8
73
57.5
CC00G193670
Cyclotella cryptica
9.0e-21
100.5
78
59.0
PSNMU-V1.4_AUG-EV-PASAV3_0106160
Pseudo-nitzschia multistriata
1.2e-20
100.1
76
60.5
ptri162080
Phaeodactylum tricornutum
3.4e-20
98.6
73
57.5
fso197370
Fistulifera solaris
1.4e-18
93.2
63
60.3
ps00G136230
Pseudo-nitzschia multiseries
3.2e-18
92.0
50
78.0
gene17980
Fragilariopsis cylindrus
7.1e-18
90.9
51
72.5
fso49700
Fistulifera solaris
7.1e-18
90.9
62
59.7
Ec-03_002860
Ectocarpus siliculosus
2.7e-17
89.0
79
51.9
Naga_101466g2
Nannochloropsis gaditana
3.5e-17
88.6
65
56.9
ENSG00000213221
Homo sapiens
1.0e-16
87.0
69
50.7
FBgn0030676
Drosophila melanogaster
4.3e-15
81.6
75
48.0
Cre07.g334851
Chlamydomonas reinhardtii
9.6e-15
80.5
71
46.5
tho264800
Thalassiosira oceanica
9.6e-15
80.5
78
43.6
tho369660
Thalassiosira oceanica
1.3e-14
80.1
54
57.4
CM20G05950
Cyanidioschyzon merolae
1.1e-13
77.0
50
62.0
pte746760
Paramecium tetraurelia
1.4e-13
76.6
69
43.5
SPAC24H6.02c
Schizosaccharomyces pombe
1.8e-13
76.3
66
45.5
Pp3c10_20870
Physcomitrella patens
6.9e-13
74.3
73
47.9
AT3G54826
Arabidopsis thaliana
4.5e-12
71.6
71
49.3
WBGene00018723
Caenorhabditis elegans
9.9e-12
70.5
72
44.4
emh406340
Emiliania huxleyi
1.1e-10
67.0
63
44.4
YNL310C
Saccharomyces cerevisiae strain S288C
1.4e-10
66.6
68
41.2
emh482890
Emiliania huxleyi
4.2e-10
65.1
68
41.2
Sro979_g227270
Seminavis robusta
7.1e-10
64.3
74
41.9
ccr43860
Chondrus crispus
7.9e-09
60.8
78
38.5
FBgn0030679
Drosophila melanogaster
1.0e-08
60.5
48
50.0
ptri94080
Phaeodactylum tricornutum
1.3e-08
60.1
45
53.3
emh732410
Emiliania huxleyi
9.6e-07
53.9
72
40.3
emh171210
Emiliania huxleyi
9.6e-07
53.9
72
40.3
PSNMU-V1.4_AUG-EV-PASAV3_0117970
Pseudo-nitzschia multistriata
2.1e-06
52.8
41
46.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing