Gene Overview  


General information


Gene id
AT4G34480
Species
Arabidopsis thaliana
Transcript
AT4G34480.1
Coordinates
16481147 - 16483988
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000056   208 genes in 6 species
Sub family
ORTHO017246   3 genes in 2 species
Duplication type
Block duplicate
Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G16230.1); Has 576 Blast hits to 566 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 570; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;O-Glycosyl hydrolases family 17 protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0003824catalytic activityC_Hunter31082570.0000464417
InterPro domain(s)
Interpro idDescription
IPR012946 X8
IPR000490 Glycoside hydrolase, family 17
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR017853 Glycoside hydrolase, catalytic core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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