Sub-family  

Parent family
HOM000019
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
osa
Oryza sativa (2 genes)
ppa
Physcomitrella patens (1 gene)



The gene family ORTHO013963 has 4 genes in 3 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 4 records out of 4 total, starting on record 1, ending on 4

gene_id species description comment strand chr outlier
AT5G45290 ath RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;RING/U-box superfamily protein transcript=eq;prot=eq; - 5 No
OS02G55520 osa zinc finger, C3HC4 type domain containing protein, expressed transcript=eq;prot=eq; - 2 No
OS05G32350 osa zinc finger, C3HC4 type domain containing protein, expressed transcript=eq;prot=eq; + 5 No
PP00129G00490 ppa NULL name=e_gw1.129.78.1,pid=136470,prot=eq,tid=136470 + scaffold_129 No
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