Sub-family  

Parent family
HOM000828
 
Keywords


Overview of gene family content



The gene family ORTHO001897 has 19 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AT1G04410 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; - 1 No
AT5G43330 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; + 5 No
AT5G56720 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 9504 Blast hits to 9504 proteins in 2703 species: Archae - 135; Bacteria - 5560; Metazoa - 1205; Fungi - 155; Plants - 523; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; + 5 No
CM20G06110 cme malate dehydrogenase, cytoplasmic pid=CMT611C; + c20f0010 No
CNC64A_021G00140 cnc64a name=estExt_Genewise1.C_210008;pid=32420;prot=eq;tid=32420;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - scaffold_21 No
CR02G15630 cre name=acegs_kg.scaffold_24000043;pid=158129;prot=eq;tid=158129;transcript=eq;fatm=NAD-dependent malate dehydrogenase + chromosome_2 No
CV10G01270 cvu name=estExt_Genewise1.C_100136;pid=37834;prot=eq;tid=37834;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - scaffold_10 No
ES0209G00140 esi Malate dehydrogenase;;Subcellular localisation: signal peptide; name=MDH;pid=Esi0209_0031; - scaffold_209 No
ES0344G00030 esi conserved unknown protein;;Subcellular localisation: other localisation; pid=Esi0344_0024; - scaffold_344 No
MP06G00250 mpu name=estExt_fgenesh1_kg.C_60001;pid=49609;prot=eq;tid=49609;transcript=eq;fatm=NAD-dependent malate dehydrogenase - scaffold_6 No
MRCC299_03G00210 mrcc299 name=fgenesh2_pg.C_Chr_03000014;pid=99233;prot=eq;tid=99233;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - Chr_03 No
OL06G00040 olu NULL name=ost_06_001_014,pid=87414,prot=eq,tid=87414;fatm=NAD-dependent malate dehydrogenase + Chr_6 No
ORCC809_06G00120 orcc809 name=EuGene.0600010011;pid=91886;prot=eq;tid=91886;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) + chr_6 No
OS04G46560 osa lactate%2Fmalate dehydrogenase, putative, expressed transcript=eq;prot=eq; + 4 No
OS10G33800 osa lactate%2Fmalate dehydrogenase, putative, expressed transcript=eq;prot=eq; + 10 No
OT06G00180 ota cytosolic malate dehydrogenase (ISS); name=OT06G00180;protein_id=CAL53277.1;prot=eq;fatm=cytosolic malate dehydrogenase (ISS) + chrom06 No
PP00235G00340 ppa NULL name=estExt_gwp_gw1.C_2350046,pid=195276,prot=eq,tid=195276 + scaffold_235 No
TP07G06180 tps name=estExt_gwp_gw1.C_chr_70437;protein_id=41425;transcript_id=41425;transcript=eq;prot=eq;;fatm=Malate dehydrogenase 1, NAD (soluble) - chr_7 No
VC0019G00120 vca name=estExt_fgenesh4_kg.C_190001;pid=109769;prot=eq;tid=109769;transcript=eq;fatm=NAD-dependent malate dehydrogenase + scaffold_19 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier