Gene family 
- Id
- HOM003976
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO013403 (4 genes in 1 species)
ORTHO013677 (4 genes in 1 species)
ORTHO013845 (4 genes in 2 species)
View all sub-families (3)
- Keywords
-
Overview of gene family content
The gene family HOM003976 has 14 genes in 2 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM003976
Page 1 of 1, showing 14 records out of 14 total, starting on record 1, ending on 14
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AT2G18630 | ath | Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 2 | No |
| AT3G28270 | ath | Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G28290.1); Has 636 Blast hits to 621 proteins in 191 species: Archae - 37; Bacteria - 189; Metazoa - 134; Fungi - 25; Plants - 165; Viruses - 1; Other Eukaryotes - 85 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 3 | No |
| AT3G28290 | ath | Encodes a protein with sequence similarity to integrins. Localized to the cytoplasm and plasma membrane. Expressed in all tissues assayed.;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 3 | No |
| AT3G28300 | ath | Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 3 | No |
| AT3G28310 | ath | Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G28290.1); Has 57 Blast hits to 57 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 3 | No |
| AT3G28320 | ath | Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G28290.1); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 23; Metazoa - 1; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 3 | No |
| AT3G57100 | ath | Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34320.1); Has 123 Blast hits to 123 proteins in 12 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 116; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | - | 3 | No |
| AT4G34320 | ath | Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 4 | No |
| AT4G34330 | ath | Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34320.1); Has 165 Blast hits to 164 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | + | 4 | No |
| AT5G66660 | ath | Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | - | 5 | No |
| AT5G66670 | ath | Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | - | 5 | No |
| AT5G66675 | ath | Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT2G18630.1); Has 241 Blast hits to 232 proteins in 16 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Protein of unknown function (DUF677) | transcript=eq;prot=eq; | - | 5 | No |
| OS03G10240 | osa | DUF677 domain containing protein, putative, expressed | transcript=eq;prot=eq; | + | 3 | No |
| OS10G21540 | osa | DUF677 domain containing protein, putative | transcript=eq;prot=eq; | + | 10 | No |
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