Gene family  

Sub-families
ORTHO001897 (19 genes in 15 species)
ORTHO003073 (16 genes in 14 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (4 genes)
bprrcc1105
Bathycoccus prasinos (1 gene)
cme
Cyanidioschyzon merolae (2 genes)
cnc64a
Chlorella sp NC64A (2 genes)
cre
Chlamydomonas reinhardtii (2 genes)
cvu
Coccomyxa sp. C169 (3 genes)
esi
Ectocarpus siliculosus (3 genes)
mpu
Micromonas pusilla strain CCMP1545 (2 genes)
mrcc299
Micromonas sp RCC299 (2 genes)
olu
Ostreococcus lucimarinus (2 genes)
orcc809
Ostreococcus sp RCC809 (2 genes)
osa
Oryza sativa (3 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (4 genes)
tps
Thalassiosira pseudonana (1 gene)
vca
Volvox carteri (2 genes)



The gene family HOM000828 has 37 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 37 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT1G04410 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; - 1 No
AT5G43330 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; + 5 No
AT5G56720 ath Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 9504 Blast hits to 9504 proteins in 2703 species: Archae - 135; Bacteria - 5560; Metazoa - 1205; Fungi - 155; Plants - 523; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink).;Lactate/malate dehydrogenase family protein transcript=eq;prot=eq; + 5 No
AT5G58330 ath lactate/malate dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, malate dehydrogenase activity, catalytic activity, malate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, malate metabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 10000 Blast hits to 9996 proteins in 2628 species: Archae - 125; Bacteria - 6319; Metazoa - 780; Fungi - 166; Plants - 568; Viruses - 0; Other Eukaryotes - 2042 (source: NCBI BLink).;lactate/malate dehydrogenase family protein transcript=eq;prot=eq; - 5 No
BPRRCC1105_04G00930 bprrcc1105 malate dehydrogenase;; pid=Bathy04g00930;fatm=Malate dehydrogenase [NADP], chloroplastic + chrom_04 No
CM16G01940 cme malate dehydrogenase, mitochondrial precursor pid=CMP193C; - c16f0001 No
CM20G06110 cme malate dehydrogenase, cytoplasmic pid=CMT611C; + c20f0010 No
CNC64A_001G04750 cnc64a name=estExt_Genewise1.C_10544;pid=29326;prot=eq;tid=29326;transcript=eq;fatm=Malate dehydrogenase [NADP], chloroplastic + scaffold_1 No
CNC64A_021G00140 cnc64a name=estExt_Genewise1.C_210008;pid=32420;prot=eq;tid=32420;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - scaffold_21 No
CR02G15630 cre name=acegs_kg.scaffold_24000043;pid=158129;prot=eq;tid=158129;transcript=eq;fatm=NAD-dependent malate dehydrogenase + chromosome_2 No
CR09G05110 cre name=estExt_fgenesh2_pg.C_300054;pid=192083;prot=eq;tid=192083;transcript=eq;fatm=plastidic NADP-dependent malate dehydrogenase - chromosome_9 No
CV04G06380 cvu name=estExt_Genewise1.C_40810;pid=36453;prot=eq;tid=36453;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) + scaffold_4 No
CV06G03820 cvu name=e_gw1.6.233.1;pid=28345;prot=eq;tid=28345;transcript=eq;fatm=Basis For Light Acitvation Of A Chloroplast Enzyme. The Structure + scaffold_6 No
CV10G01270 cvu name=estExt_Genewise1.C_100136;pid=37834;prot=eq;tid=37834;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - scaffold_10 No
ES0209G00140 esi Malate dehydrogenase;;Subcellular localisation: signal peptide; name=MDH;pid=Esi0209_0031; - scaffold_209 No
ES0209G00250 esi cytosolic malate dehydrogenase;;Subcellular localisation: other localisation; pid=Esi0209_0029; - scaffold_209 No
ES0344G00030 esi conserved unknown protein;;Subcellular localisation: other localisation; pid=Esi0344_0024; - scaffold_344 No
MP05G01410 mpu name=EuGene.0000050153;pid=57848;prot=eq;tid=57848;transcript=eq;fatm=NADP-dependent malate dehydrogenase chloroplast precursor + scaffold_5 No
MP06G00250 mpu name=estExt_fgenesh1_kg.C_60001;pid=49609;prot=eq;tid=49609;transcript=eq;fatm=NAD-dependent malate dehydrogenase - scaffold_6 No
MRCC299_03G00210 mrcc299 name=fgenesh2_pg.C_Chr_03000014;pid=99233;prot=eq;tid=99233;transcript=eq;fatm=Malate dehydrogenase 1, NAD (soluble) - Chr_03 No
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