Gene description
GO/InterPro description
Gene
Gene Family
GO ID
All species
Ostreococcus lucimarinus
Ostreococcus sp RCC809
Ostreococcus tauri
Bathycoccus prasinos
Micromonas pusilla strain CCMP1545
Micromonas sp RCC299
Coccomyxa sp. C169
Chlorella sp NC64A
Volvox carteri
Chlamydomonas reinhardtii
Arabidopsis thaliana
Oryza sativa
Physcomitrella patens
Cyanidioschyzon merolae
Phaeodactylum tricornutum
Fragilariopsis cylindrus
Thalassiosira pseudonana
Ectocarpus siliculosus
Aureococcus anophagefferens
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PLAZA versions
Pico-plaza
Plaza 1.0
Plaza 2.0
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Program
blastn
blastp
blastx
tblastn
tblastx
Database
Pico-Plaza protein sequences
Pico-Plaza transcript sequences
Pico-Plaza genome sequence Arabidopsis thaliana
Pico-Plaza genome sequence Aureococcus anophagefferens
Pico-Plaza genome sequence Bathycoccus prasinos
Pico-Plaza genome sequence Chlamydomonas reinhardtii
Pico-Plaza genome sequence Chlorella sp NC64A
Pico-Plaza genome sequence Coccomyxa sp. C169
Pico-Plaza genome sequence Cyanidioschyzon merolae
Pico-Plaza genome sequence Ectocarpus siliculosus
Pico-Plaza genome sequence Fragilariopsis cylindrus
Pico-Plaza genome sequence Micromonas pusilla strain CCMP1545
Pico-Plaza genome sequence Micromonas sp RCC299
Pico-Plaza genome sequence Oryza sativa
Pico-Plaza genome sequence Ostreococcus lucimarinus
Pico-Plaza genome sequence Ostreococcus sp RCC809
Pico-Plaza genome sequence Ostreococcus tauri
Pico-Plaza genome sequence Phaeodactylum tricornutum
Pico-Plaza genome sequence Physcomitrella patens
Pico-Plaza genome sequence Thalassiosira pseudonana
Pico-Plaza genome sequence Volvox carteri
Enter sequence below in
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format
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Expect
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1e-5
0.001
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1
10
Matrix
PAM30
PAM70
BLOSUM45
BLOSUM62
BLOSUM80
Perform gapped alignment
Query Genetic codes - (T)Blastx only
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Alignment view
Pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
query-anchored no identities and blunt ends
flat query-anchored, no identities and blunt ends
XML Blast output
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Alignments
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