Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
signalling.light.COP9 signalosome
#associated genes62
#associated gene families13
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | ath | atr | cmi | gbi | gmo | osa | pab | pgl | pme | ppa | ppi | psi | psy | pta | ptr | tba |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D004540 | 28 | 8 | 15 | 2 | 1 | 1 | 1 | 2 | 3 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 7 | 2 | 1 |
| HOM03D004836 | 27 | 8 | 15 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 2 | 4 | 2 | 1 | 0 | 1 | 1 | 4 | 1 |
| HOM03D002722 | 43 | 7 | 16 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 2 | 10 | 3 | 7 | 2 | 2 | 4 | 2 | 1 |
| HOM03D005390 | 25 | 7 | 16 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 1 |
| HOM03D004058 | 31 | 6 | 16 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 4 | 2 | 4 | 3 | 1 | 2 | 2 | 1 |
| HOM03D006476 | 21 | 6 | 14 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 1 | 2 | 1 | 1 | 0 | 1 | 0 | 3 | 1 |
| HOM03D001969 | 55 | 5 | 16 | 3 | 2 | 1 | 2 | 4 | 2 | 3 | 4 | 6 | 2 | 4 | 2 | 3 | 5 | 6 | 6 |
| HOM03D004222 | 30 | 5 | 16 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 2 | 3 | 1 | 4 | 2 | 3 | 1 | 2 | 1 |
| HOM03D005937 | 23 | 5 | 16 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 4 | 2 | 1 |
| HOM03D009876 | 7 | 2 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 4 | 0 |
| HOM03D000957 | 95 | 1 | 15 | 3 | 2 | 4 | 3 | 5 | 0 | 3 | 8 | 14 | 8 | 14 | 7 | 8 | 8 | 2 | 6 |
| HOM03D001694 | 63 | 1 | 16 | 1 | 3 | 2 | 5 | 2 | 4 | 9 | 3 | 9 | 3 | 12 | 2 | 2 | 2 | 2 | 2 |
| HOM03D009015 | 10 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".