Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
RNA.regulation of transcription.GRAS transcription factor family
#associated genes180
#associated gene families7
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | ath | atr | cmi | gbi | gmo | osa | pab | pgl | pme | ppa | ppi | psi | psy | pta | ptr | tba |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D000090 | 596 | 161 | 16 | 32 | 41 | 26 | 45 | 14 | 54 | 36 | 16 | 34 | 39 | 29 | 13 | 18 | 65 | 89 | 45 |
| HOM03D002533 | 45 | 9 | 13 | 1 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 3 | 5 | 4 | 1 | 1 | 22 | 2 | 1 |
| HOM03D010414 | 6 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 |
| HOM03D000550 | 144 | 1 | 16 | 9 | 5 | 2 | 5 | 8 | 8 | 10 | 4 | 11 | 9 | 18 | 3 | 8 | 3 | 33 | 8 |
| HOM03D001646 | 64 | 1 | 9 | 0 | 3 | 0 | 0 | 0 | 0 | 6 | 0 | 11 | 0 | 8 | 1 | 1 | 31 | 1 | 2 |
| HOM03D014425 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| HOM03D018610 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".