Gene: PT17G05480 (Populus trichocarpa)

Overview

Gene Identifier
PT17G05480
Transcript Identifier
PT17G05480.1
Gene Type
Coding gene
Location
Chr17 : 4863538-4867600 : positive

Family

Gene family
HOM03D000112
(505 genes in 16 species)
specific family
Subfamily
ORTHO03D002431
(19 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
Myb family transcription factor APL
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.017G054800.1
idPAC:26985380

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009567ISOPLAZA Integrative Orthologydouble fertilization forming a zygote and endospermAT4G13640
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT3G24120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003682IEAInterProchromatin binding
GO:0005488IEAPLAZA HomologybindingHOM03D000096
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000096
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000096
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000096

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR006447Myb domain, plants
IPR017930Myb domain
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
IPR009057Homeodomain-like
Mapman id Description
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBG2-like
PlantTFDBG2-like