Gene: PT13G10510 (Populus trichocarpa)

Overview

Gene Identifier
PT13G10510
Transcript Identifier
PT13G10510.1
Gene Type
Coding gene
Location
Chr13 : 11880266-11887422 : negative

Family

Gene family
HOM03D000192
(309 genes in 16 species)
specific family
Subfamily
ORTHO03D000027
(75 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Beta-galactosidase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.013G105100.1
idPAC:26994400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0048354ISOPLAZA Tree-based Orthologymucilage biosynthetic process involved in seed coat developmentAT5G63800
GO:0009827ISOPLAZA Tree-based Orthologyplant-type cell wall modificationAT5G63800
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000138
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000138
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000138

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553IEAGenome Projecthydrolase activity, hydrolyzing O-glycosyl compounds
GO:0030246IEAGenome Projectcarbohydrate binding
GO:0004565IEAGenome Projectbeta-galactosidase activity
GO:0003824IEAInterProcatalytic activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000138
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000138

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009341IEAGenome Projectbeta-galactosidase complex
GO:0048046ISOPLAZA Tree-based OrthologyapoplastAT5G63800
GO:0005618ISOPLAZA Tree-based Orthologycell wallAT5G63800

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008979Galactose-binding domain-like
IPR013781Glycoside hydrolase, catalytic domain
IPR001944Glycoside hydrolase, family 35
IPR019801Glycoside hydrolase, family 35, conserved site
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domain
IPR025300Beta-galactosidase jelly roll domain
IPR017853Glycoside hydrolase, superfamily
Mapman id Description
26.3.2misc.gluco-, galacto- and mannosidases.beta-galactosidase
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network