Gene: PT06G03840 (Populus trichocarpa)

Overview

Gene Identifier
PT06G03840
Transcript Identifier
PT06G03840.1
Gene Type
Coding gene
Location
Chr06 : 2690215-2704327 : negative

Family

Gene family
HOM03D000157
(377 genes in 16 species)
specific family
Subfamily
ORTHO03D002318
(19 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
Glutamate synthase 1 [NADH], chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.006G038400.4
idPAC:27007933

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006537IEAGenome Projectglutamate biosynthetic process
GO:0006807IEAGenome Projectnitrogen compound metabolic process
GO:0080114ISOPLAZA Integrative Orthologypositive regulation of glycine hydroxymethyltransferase activityAT5G04140
GO:0009744ISOPLAZA Integrative Orthologyresponse to sucroseAT5G04140
GO:0009853ISOPLAZA Integrative OrthologyphotorespirationAT5G04140
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT5G04140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0015930IEAGenome Projectglutamate synthase activity
GO:0016638IEAGenome Projectoxidoreductase activity, acting on the CH-NH2 group of donors
GO:0003824IEAInterProcatalytic activity
GO:0016041ISOPLAZA Integrative Orthologyglutamate synthase (ferredoxin) activityAT5G04140
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G04140

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G04140
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G04140
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT5G04140
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G04140
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G04140 AT2G41220
GO:0009536ISOPLAZA Integrative OrthologyplastidAT2G41220
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G04140 AT2G41220

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006982Glutamate synthase, central-N
IPR002489Glutamate synthase, alpha subunit, C-terminal
IPR013785Aldolase-type TIM barrel
IPR002932Glutamate synthase, central-C
IPR017932Glutamine amidotransferase type 2 domain
IPR000583Class II glutamine amidotransferase domain
Mapman id Description
12.2.1N-metabolism.ammonia metabolism.glutamate synthase
No SignalP domains detected for this gene.