PLAZA Gymnosperms gene overview : PT02G00520

Gene: PT02G00520 (Populus trichocarpa)

Overview

Gene Identifier: PT02G00520
Transcript Identifier: PT02G00520.1
Gene Type: Coding gene
Location: Chr02 : 291323-291832 : negative

Family

Gene family: HOM03D004785
(27 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): Short-chain dehydrogenase/reductase family 42E member 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Potri.002G005200.1
id	PAC:27022861

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006694	IEA	PLAZA Homology	steroid biosynthetic process	HOM03D004769
GO:0055114	IEA	PLAZA Homology	oxidation-reduction process	HOM03D004769

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003854	IEA	PLAZA Homology	3-beta-hydroxy-delta5-steroid dehydrogenase activity	HOM03D004769

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

No InterPro domains detected for this gene.

Mapman id	Description
11.8.4	lipid metabolism.exotics (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network