Gene: PT01G14890 (Populus trichocarpa)

Overview

Gene Identifier
PT01G14890
Transcript Identifier
PT01G14890.1
Gene Type
Coding gene
Location
Chr01 : 12278327-12281660 : positive

Family

Gene family
HOM03D000241
(258 genes in 16 species)
specific family
Subfamily
ORTHO03D005355
(16 genes in 10 species)
specific family

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Descriptions

Description (AnnoMine)
Beta-amylase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.001G148900.1
idPAC:27042375

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000272IEAGenome Projectpolysaccharide catabolic process
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0005983ISOPLAZA Integrative Orthologystarch catabolic processAT5G55700 AT4G17090
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT4G17090
GO:0000024ISOPLAZA Integrative Orthologymaltose biosynthetic processAT4G17090
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000326
GO:0005976IEAPLAZA Homologypolysaccharide metabolic processHOM03D000326
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000326
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000326
GO:0016052IEAPLAZA Homologycarbohydrate catabolic processHOM03D000326

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016161IEAGenome Projectbeta-amylase activity
GO:0003824IEAInterProcatalytic activity
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000326
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000326
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000326
GO:0016160IEAPLAZA Homologyamylase activityHOM03D000326

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G55700
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G17090

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001554Glycoside hydrolase, family 14
IPR001371Glycoside hydrolase, family 14B, plant
IPR017853Glycoside hydrolase, superfamily
IPR013781Glycoside hydrolase, catalytic domain
IPR018238Glycoside hydrolase, family 14, conserved site
Mapman id Description
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase
No SignalP domains detected for this gene.