Gene: PT01G11170 (Populus trichocarpa)

Overview

Gene Identifier
PT01G11170
Transcript Identifier
PT01G11170.1
Gene Type
Coding gene
Location
Chr01 : 8908041-8911711 : positive

Family

Gene family
HOM03D003497
(35 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Hydroxymethylglutaryl-CoA synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.001G111700.1
idPAC:27047972

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008299IEAGenome Projectisoprenoid biosynthetic process
GO:0008152IEAInterPrometabolic process
GO:0019287ISOPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT4G11820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004421IEAGenome Projecthydroxymethylglutaryl-CoA synthase activity
GO:0003824IEAInterProcatalytic activity
GO:0003985ISOPLAZA Integrative Orthologyacetyl-CoA C-acetyltransferase activityAT4G11820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G11820
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G11820

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
IPR010122Hydroxymethylglutaryl-CoA synthase, eukaryotic
IPR013746Hydroxymethylglutaryl-coenzyme A synthase C-terminal
IPR016039Thiolase-like
IPR016038Thiolase-like, subgroup
IPR000590Hydroxymethylglutaryl-coenzyme A synthase, active site
Mapman id Description
16.1.2.2secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase
No SignalP domains detected for this gene.