Gene: PP00568G00050 (Physcomitrella patens)

Overview

Gene Identifier
PP00568G00050
Transcript Identifier
PP00568G00050.1
Gene Type
Coding gene
Location
scaffold_568 : 39155-41239 : positive

Family

Gene family
HOM03D000125
(465 genes in 16 species)
specific family
Subfamily
ORTHO03D007339
(13 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
Histone H3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s568_8V6.1
idPAC:18058393

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAGenome Projectnucleosome assembly
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT1G01370
GO:0051307ISOPLAZA Integrative Orthologymeiotic chromosome separationAT1G01370
GO:0007126ISOPLAZA Integrative OrthologymeiosisAT1G01370
GO:0009567ISOPLAZA Integrative Orthologydouble fertilization forming a zygote and endospermAT1G01370
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000248
GO:0071824IEAPLAZA Homologyprotein-DNA complex subunit organizationHOM03D000248
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000248
GO:0071822IEAPLAZA Homologyprotein complex subunit organizationHOM03D000248
GO:0006325IEAPLAZA Homologychromatin organizationHOM03D000248
GO:0070271IEAPLAZA Homologyprotein complex biogenesisHOM03D000248
GO:0006323IEAPLAZA HomologyDNA packagingHOM03D000248
GO:0043933IEAPLAZA Homologymacromolecular complex subunit organizationHOM03D000248
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000248
GO:0031497IEAPLAZA Homologychromatin assemblyHOM03D000248
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000248
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000248
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03D000248
GO:0071103IEAPLAZA HomologyDNA conformation changeHOM03D000248
GO:0065003IEAPLAZA Homologymacromolecular complex assemblyHOM03D000248
GO:0065004IEAPLAZA Homologyprotein-DNA complex assemblyHOM03D000248
GO:0006333IEAPLAZA Homologychromatin assembly or disassemblyHOM03D000248
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000248
GO:0016043IEAPLAZA Homologycellular component organizationHOM03D000248
GO:0051276IEAPLAZA Homologychromosome organizationHOM03D000248
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000248
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000248
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000248
GO:0044085IEAPLAZA Homologycellular component biogenesisHOM03D000248
GO:0022607IEAPLAZA Homologycellular component assemblyHOM03D000248
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03D000248
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03D000248
GO:0034622IEAPLAZA Homologycellular macromolecular complex assemblyHOM03D000248
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000248
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03D000248
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000248
GO:0006461IEAPLAZA Homologyprotein complex assemblyHOM03D000248

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G01370
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03D000248
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000248

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0000786IEAGenome Projectnucleosome
GO:0000785ISOPLAZA Integrative OrthologychromatinAT1G01370
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G01370
GO:0000775ISOPLAZA Integrative Orthologychromosome, centromeric regionAT1G01370
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03D000248
GO:0032993IEAPLAZA Homologyprotein-DNA complexHOM03D000248
GO:0043226IEAPLAZA HomologyorganelleHOM03D000248
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000248
GO:0043228IEAPLAZA Homologynon-membrane-bounded organelleHOM03D000248
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000248
GO:0044815IEAPLAZA HomologyDNA packaging complexHOM03D000248
GO:0005694IEAPLAZA HomologychromosomeHOM03D000248
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000248
GO:0043232IEAPLAZA Homologyintracellular non-membrane-bounded organelleHOM03D000248
GO:0044464IEAPLAZA Homologycell partHOM03D000248
GO:0044427IEAPLAZA Homologychromosomal partHOM03D000248
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000248
GO:0044422IEAPLAZA Homologyorganelle partHOM03D000248
GO:0005623IEAPLAZA HomologycellHOM03D000248
GO:0044446IEAPLAZA Homologyintracellular organelle partHOM03D000248

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000164Histone H3
IPR007125Histone core
IPR009072Histone-fold
Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.