Gene: PP00160G00120 (Physcomitrella patens)

Overview

Gene Identifier
PP00160G00120
Transcript Identifier
PP00160G00120.1
Gene Type
Coding gene
Location
scaffold_160 : 159270-163254 : negative

Family

Gene family
HOM03D004286
(30 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Squalene synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s160_27V6.1
idPAC:18068378

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0008610IEAPLAZA Homologylipid biosynthetic processHOM03D002838
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT4G34640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016740IEAGenome Projecttransferase activity
GO:0004310ISOPLAZA Integrative Orthologyfarnesyl-diphosphate farnesyltransferase activityAT4G34640 AT4G34650

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAPLAZA Homologyintegral to membraneHOM03D002838
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G34640
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G34640
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT4G34640

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008949Terpenoid synthase
IPR002060Squalene/phytoene synthase
Mapman id Description
11.8.8lipid metabolism.exotics (steroids, squalene etc).squalene synthase
No SignalP domains detected for this gene.