PLAZA Gymnosperms gene overview : PP00060G00820

Gene: PP00060G00820 (Physcomitrella patens)

Overview

Gene Identifier: PP00060G00820
Transcript Identifier: PP00060G00820.1
Gene Type: Coding gene
Location: scaffold_60 : 1100893-1104841 : negative

Family

Gene family: HOM03D004487
(29 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine): CoA hydratase 2, peroxisomal

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Pp1s60_178V6.1
id	PAC:18049154

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0033542	ISO	PLAZA Integrative Orthology	fatty acid beta-oxidation, unsaturated, even number	AT1G76150

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0080023	ISO	PLAZA Integrative Orthology	3R-hydroxyacyl-CoA dehydratase activity	AT1G76150

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005777	ISO	PLAZA Integrative Orthology	peroxisome	AT1G76150

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR002539	MaoC-like domain
IPR027090	Enoyl-CoA hydratase 2

Mapman id	Description
11.8	lipid metabolism.exotics(steroids, squalene etc)

No SignalP domains detected for this gene.