Gene: PP00042G00770 (Physcomitrella patens)

Overview

Gene Identifier
PP00042G00770
Transcript Identifier
PP00042G00770.1
Gene Type
Coding gene
Location
scaffold_42 : 1457099-1459352 : positive

Family

Gene family
HOM03D000637
(130 genes in 16 species)
specific family
Subfamily
ORTHO03D002918
(19 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor Y subunit A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s42_174V6.1
idPAC:18047515

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009567ISOPLAZA Integrative Orthologydouble fertilization forming a zygote and endospermAT3G05690
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G34720 AT1G30500
GO:0048510ISOPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT2G34720
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000452
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000452
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000452
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000452
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000452
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000452
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000452
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000452
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000452
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000452
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000452
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000452
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000452
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000452
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000452
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000452
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000452
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000452
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000452
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000452
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000452
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000452
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000452

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000452

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0016602IEAInterProCCAAT-binding factor complex
GO:0044428IEAPLAZA Homologynuclear partHOM03D000452
GO:0005667IEAPLAZA Homologytranscription factor complexHOM03D000452
GO:0044798IEAPLAZA Homologynuclear transcription factor complexHOM03D000452

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001289CCAAT-binding transcription factor, subunit B
IPR018362CCAAT-binding factor, conserved site
Mapman id Description
27.3.14RNA.regulation of transcription.CCAAT box binding factor family, HAP2
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBNF-YA