PLAZA Gymnosperms gene overview : PP00031G00080

Gene: PP00031G00080 (Physcomitrella patens)

Overview

Gene Identifier: PP00031G00080
Transcript Identifier: PP00031G00080.1
Gene Type: Coding gene
Location: scaffold_31 : 75015-77931 : positive

Family

Gene family: HOM03D005503
(24 genes in 15 species)
specific family
Subfamily: ORTHO03D004838
(16 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine): Glycerophosphoryl diester phosphodiesterase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Pp1s31_10V6.1
id	PAC:18071505

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006071	IEA	Genome Project	glycerol metabolic process
GO:0006629	IEA	InterPro	lipid metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008889	IEA	Genome Project	glycerophosphodiester phosphodiesterase activity
GO:0008081	IEA	InterPro	phosphoric diester hydrolase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT1G74210

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR004129	Glycerophosphoryl diester phosphodiesterase
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain

Mapman id	Description
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase

No SignalP domains detected for this gene.