Gene: PP00013G01160 (Physcomitrella patens)
Overview 
- Gene Identifier
- PP00013G01160
- Transcript Identifier
- PP00013G01160.1
- Gene Type
- Coding gene
- Location
- scaffold_13 : 1483302-1486077 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
LAG1 longevity assurance homolog 3
Description of best ortholog(s):

Identifiers
| Identifier | Name |
|---|---|
| pid | Pp1s13_229V6.1 |
| id | PAC:18064716 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0042761 | ISO | PLAZA Integrative Orthology | very long-chain fatty acid biosynthetic process | AT1G13580 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0050291 | ISO | PLAZA Integrative Orthology | sphingosine N-acyltransferase activity | AT1G13580 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0016021 | IEA | Genome Project | integral to membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G25540 AT1G13580 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G25540 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G25540 |
Color Legend
| Computational Reviewed Evidence |
| Electronic Evidence |
| Experimental Evidence |
| InterPro | Description |
|---|---|
| IPR006634 | TRAM/LAG1/CLN8 homology domain |
| Mapman id | Description |
|---|---|
| 11.8.1 | lipid metabolism.exotics (steroids, squalene etc).sphingolipids |
No SignalP domains detected for this gene.
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench