PLAZA Gymnosperms gene overview : OS12G43670

Gene: OS12G43670 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS12G43670
Transcript Identifier: OS12G43670.1
Gene Type: Coding gene
Location: 12 : 27132643-27134623 : negative

Family

Gene family: HOM03D007699
(16 genes in 13 species)
specific family

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Descriptions

Description: ergosterol biosynthetic protein 28, putative, expressed

Description (AnnoMine): Ergosterol biosynthetic protein 28

Identifiers

Identifier	Name
transcript_id	LOC_OS12G43670.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	RCA	Gene Ontology	membrane	GR_REF:8210
GO:0005739	RCA	Gene Ontology	mitochondrion	GR_REF:7047
GO:0016021	IEA	InterPro	integral to membrane

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR005352	Erg28

Mapman id	Description
11.8	lipid metabolism.exotics(steroids, squalene etc)

No SignalP domains detected for this gene.