PLAZA Gymnosperms gene overview : OS10G04620

Gene: OS10G04620 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS10G04620
Transcript Identifier: OS10G04620.1
Gene Type: Coding gene
Location: 10 : 2201765-2206439 : positive

Family

Gene family: HOM03D000221
(274 genes in 16 species)
specific family
Subfamily: ORTHO03D006560
(14 genes in 12 species)
specific family

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Descriptions

Description: OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed

Description (AnnoMine): Caffeoylshikimate esterase

Identifiers

Identifier	Name
transcript_id	LOC_OS10G04620.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009536	RCA	Gene Ontology	plastid	GR_REF:7047
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT5G16120

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR000073	Alpha/beta hydrolase fold-1

Mapman id	Description
11.9.2.2	lipid metabolism.lipid degradation.lipases.acylglycerol lipase

No SignalP domains detected for this gene.