PLAZA Gymnosperms gene overview : OS09G37280

Gene: OS09G37280 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS09G37280
Transcript Identifier: OS09G37280.1
Gene Type: Coding gene
Location: 9 : 21538220-21542833 : negative

Family

Gene family: HOM03D004487
(29 genes in 15 species)
specific family

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Descriptions

Description: peroxisomal multifunctional enzyme type 2, putative, expressed

Description (AnnoMine): CoA hydratase 2, peroxisomal

Identifiers

Identifier	Name
transcript_id	LOC_OS09G37280.1

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	InterPro	metabolic process
GO:0033542	ISO	PLAZA Integrative Orthology	fatty acid beta-oxidation, unsaturated, even number	AT1G76150

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0080023	ISO	PLAZA Integrative Orthology	3R-hydroxyacyl-CoA dehydratase activity	AT1G76150

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005777	ISO	PLAZA Integrative Orthology	peroxisome	AT1G76150

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR027090	Enoyl-CoA hydratase 2
IPR002539	MaoC-like domain

Mapman id	Description
11.8	lipid metabolism.exotics(steroids, squalene etc)

No SignalP domains detected for this gene.