Gene: OS07G31850 (Oryza sativa ssp. japonica)

Overview

Gene Identifier
OS07G31850
Transcript Identifier
OS07G31850.1
Gene Type
Coding gene
Location
7 : 18924839-18931239 : negative

Family

Gene family
HOM03D006077
(22 genes in 13 species)
specific family
Subfamily
ORTHO03D003501
(18 genes in 13 species)
specific family

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Descriptions

Description
zinc finger, C3HC4 type domain containing protein, expressed
Description (AnnoMine)
DSC E3 ubiquitin ligase complex subunit 1

Identifiers

Identifier Name
transcript_idLOC_OS07G31850.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827ISOPLAZA Integrative Orthologyplant-type cell wall modificationAT4G28370
GO:0048363ISOPLAZA Integrative Orthologymucilage pectin metabolic processAT4G28370
GO:0080001ISOPLAZA Integrative Orthologymucilage extrusion from seed coatAT4G28370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT4G28370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020RCAGene OntologymembraneGR_REF:8210
GO:0016023RCAGene Ontologycytoplasmic membrane-bounded vesicleGR_REF:7047
GO:0012505ISOPLAZA Integrative Orthologyendomembrane systemAT4G28370

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.