Gene: OS04G58550 (Oryza sativa ssp. japonica)

Overview

Gene Identifier
OS04G58550
Transcript Identifier
OS04G58550.1
Gene Type
Coding gene
Location
4 : 34810919-34813410 : negative

Family

Gene family
HOM03D001603
(65 genes in 16 species)
specific family
Subfamily
ORTHO03D004436
(17 genes in 15 species)
specific family

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Descriptions

Description
acyl-CoA-binding domain-containing protein 6, putative, expressed
Description (AnnoMine)
repeat, PH and SEC7 domain containing protein secG

Identifiers

Identifier Name
transcript_idLOC_OS04G58550.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006869ISOPLAZA Integrative Orthologylipid transportAT4G27780 AT5G53470
GO:0010288ISOPLAZA Integrative Orthologyresponse to lead ionAT4G27780 AT5G53470
GO:0006629ISOPLAZA Integrative Orthologylipid metabolic processAT5G53470
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G53470
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT5G53470
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT5G53470
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT5G53470
GO:1900140ISOPLAZA Integrative Orthologyregulation of seedling developmentAT5G53470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0000062IEAInterProfatty-acyl-CoA binding
GO:0032791ISOPLAZA Integrative Orthologylead ion bindingAT4G27780 AT5G53470
GO:0070300ISOPLAZA Integrative Orthologyphosphatidic acid bindingAT5G53470
GO:0008289ISOPLAZA Integrative Orthologylipid bindingAT5G53470

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016023RCAGene Ontologycytoplasmic membrane-bounded vesicleGR_REF:7047
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G27780
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G27780 AT5G53470
GO:0009514ISOPLAZA Integrative OrthologyglyoxysomeAT4G27780
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT5G53470

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002110Ankyrin repeat
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle
IPR000582Acyl-CoA-binding protein, ACBP
IPR020683Ankyrin repeat-containing domain
Mapman id Description
11.1.13lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein
No SignalP domains detected for this gene.