Gene: OS03G59040 (Oryza sativa ssp. japonica)

Overview

Gene Identifier
OS03G59040
Transcript Identifier
OS03G59040.1
Gene Type
Coding gene
Location
3 : 33605595-33611945 : positive

Family

Gene family
HOM03D004286
(30 genes in 16 species)
specific family
Subfamily
ORTHO03D002131
(20 genes in 16 species)
specific family

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Descriptions

Description
squalene synthetase, putative, expressed
Description (AnnoMine)
Squalene synthase

Identifiers

Identifier Name
transcript_idLOC_OS03G59040.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008610IEAInterProlipid biosynthetic process
GO:0009058IEAInterProbiosynthetic process
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT4G34640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016765IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740IEAInterProtransferase activity
GO:0004310IEAInterProfarnesyl-diphosphate farnesyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAInterProintegral to membrane
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G34640
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G34640
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT4G34640

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008949Terpenoid synthase
IPR019845Squalene/phytoene synthase, conserved site
IPR006449Farnesyl-diphosphate farnesyltransferase
IPR002060Squalene/phytoene synthase
Mapman id Description
11.8.8lipid metabolism.exotics (steroids, squalene etc).squalene synthase
No SignalP domains detected for this gene.