Gene: OS01G47550 (Oryza sativa ssp. japonica)
Overview 
- Gene Identifier
- OS01G47550
- Transcript Identifier
- OS01G47550.1
- Gene Type
- Coding gene
- Location
- 1 : 27185694-27190465 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description
-
kinase, pfkB family, putative, expressed
- Description (AnnoMine)
-
Uncharacterized sugar kinase AF_0356
Identifiers
| Identifier | Name |
|---|---|
| transcript_id | LOC_OS01G47550.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006014 | IEA | InterPro | D-ribose metabolic process | |
| GO:0005975 | IEA | PLAZA Homology | carbohydrate metabolic process | HOM03D002184 |
| GO:0044699 | IEA | PLAZA Homology | single-organism process | HOM03D002184 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0016773 | IEA | InterPro | phosphotransferase activity, alcohol group as acceptor | |
| GO:0004747 | IEA | InterPro | ribokinase activity | |
| GO:0019200 | IEA | PLAZA Homology | carbohydrate kinase activity | HOM03D002184 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G17160 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G17160 |
Color Legend
| Computational Reviewed Evidence |
| Electronic Evidence |
| Experimental Evidence |
| Mapman id | Description |
|---|---|
| 3.5 | minor CHO metabolism.others |
No SignalP domains detected for this gene.
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench