PLAZA Gymnosperms gene overview : ATR_00119G00670

Gene: ATR_00119G00670 (Amborella trichopoda)

Overview

Gene Identifier: ATR_00119G00670
Transcript Identifier: ATR_00119G00670.1
Gene Type: Coding gene
Location: scaffold00119 : 1033138-1037728 : negative

Family

Gene family: HOM03D000219
(276 genes in 16 species)
specific family
Subfamily: ORTHO03D000196
(35 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine): Pyruvate kinase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	evm_27.TU.AmTr_v1.0_scaffold00119.68
id	evm_27.model.AmTr_v1.0_scaffold00119.68

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006096	IEA	InterPro	glycolysis
GO:1901575	IEA	PLAZA Homology	organic substance catabolic process	HOM03D000273
GO:0044763	IEA	PLAZA Homology	single-organism cellular process	HOM03D000273
GO:0006091	IEA	PLAZA Homology	generation of precursor metabolites and energy	HOM03D000273
GO:0016052	IEA	PLAZA Homology	carbohydrate catabolic process	HOM03D000273
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000273
GO:0044712	IEA	PLAZA Homology	single-organism catabolic process	HOM03D000273
GO:0006007	IEA	PLAZA Homology	glucose catabolic process	HOM03D000273
GO:0006006	IEA	PLAZA Homology	glucose metabolic process	HOM03D000273
GO:0005996	IEA	PLAZA Homology	monosaccharide metabolic process	HOM03D000273
GO:0046365	IEA	PLAZA Homology	monosaccharide catabolic process	HOM03D000273
GO:0005975	IEA	PLAZA Homology	carbohydrate metabolic process	HOM03D000273
GO:0009056	IEA	PLAZA Homology	catabolic process	HOM03D000273
GO:0019318	IEA	PLAZA Homology	hexose metabolic process	HOM03D000273
GO:0044723	IEA	PLAZA Homology	single-organism carbohydrate metabolic process	HOM03D000273
GO:0044724	IEA	PLAZA Homology	single-organism carbohydrate catabolic process	HOM03D000273
GO:0019320	IEA	PLAZA Homology	hexose catabolic process	HOM03D000273

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000287	IEA	InterPro	magnesium ion binding
GO:0030955	IEA	InterPro	potassium ion binding
GO:0003824	IEA	InterPro	catalytic activity
GO:0004743	IEA	InterPro	pyruvate kinase activity
GO:0043169	IEA	PLAZA Homology	cation binding	HOM03D000273
GO:0031420	IEA	PLAZA Homology	alkali metal ion binding	HOM03D000273
GO:0046872	IEA	PLAZA Homology	metal ion binding	HOM03D000273
GO:0016301	IEA	PLAZA Homology	kinase activity	HOM03D000273
GO:0016773	IEA	PLAZA Homology	phosphotransferase activity, alcohol group as acceptor	HOM03D000273
GO:0016772	IEA	PLAZA Homology	transferase activity, transferring phosphorus-containing groups	HOM03D000273
GO:0016740	IEA	PLAZA Homology	transferase activity	HOM03D000273

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G56350
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT3G55650

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR001697	Pyruvate kinase
IPR015806	Pyruvate kinase, beta-barrel insert domain
IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR015793	Pyruvate kinase, barrel
IPR015794	Pyruvate kinase, alpha/beta
IPR011037	Pyruvate kinase-like, insert domain
IPR015795	Pyruvate kinase, C-terminal
IPR018209	Pyruvate kinase, active site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.