Gene: ATR_00092G01520 (Amborella trichopoda)

Overview

Gene Identifier
ATR_00092G01520
Transcript Identifier
ATR_00092G01520.1
Gene Type
Coding gene
Location
scaffold00092 : 2763967-2771130 : positive

Family

Gene family
HOM03D000954
(96 genes in 16 species)
specific family
Subfamily
ORTHO03D001885
(20 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Pyruvate dehydrogenase E1 component subunit beta
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00092.156
idevm_27.model.AmTr_v1.0_scaffold00092.156

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAInterPrometabolic process
GO:0048868ISOPLAZA Integrative Orthologypollen tube developmentAT2G34590
GO:0006633ISOPLAZA Integrative Orthologyfatty acid biosynthetic processAT1G30120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAInterProcatalytic activity
GO:0008270ISOPLAZA Integrative Orthologyzinc ion bindingAT2G34590
GO:0004739ISOPLAZA Integrative Orthologypyruvate dehydrogenase (acetyl-transferring) activityAT1G30120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G34590 AT1G30120
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT2G34590 AT1G30120
GO:0010240ISOPLAZA Integrative Orthologyplastid pyruvate dehydrogenase complexAT1G30120
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT1G30120

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009014Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR005475Transketolase-like, pyrimidine-binding domain
IPR005476Transketolase, C-terminal
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.