Gene: ATR_00085G00020 (Amborella trichopoda)

Overview

Gene Identifier
ATR_00085G00020
Transcript Identifier
ATR_00085G00020.1
Gene Type
Coding gene
Location
scaffold00085 : 43176-47482 : positive

Family

Gene family
HOM03D000648
(128 genes in 15 species)
specific family
Subfamily
ORTHO03D027693
(3 genes in 3 species)
specific family

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Descriptions

Description (AnnoMine)
Probable trehalose-phosphate phosphatase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00085.2
idevm_27.model.AmTr_v1.0_scaffold00085.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAInterPrometabolic process
GO:0005992IEAInterProtrehalose biosynthetic process
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressOS02G44230
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldOS02G44230
GO:0009312IEAPLAZA Homologyoligosaccharide biosynthetic processHOM03D000470
GO:0046351IEAPLAZA Homologydisaccharide biosynthetic processHOM03D000470
GO:0009311IEAPLAZA Homologyoligosaccharide metabolic processHOM03D000470
GO:0044262IEAPLAZA Homologycellular carbohydrate metabolic processHOM03D000470
GO:0005975IEAPLAZA Homologycarbohydrate metabolic processHOM03D000470
GO:0016051IEAPLAZA Homologycarbohydrate biosynthetic processHOM03D000470
GO:0034637IEAPLAZA Homologycellular carbohydrate biosynthetic processHOM03D000470
GO:0044723IEAPLAZA Homologysingle-organism carbohydrate metabolic processHOM03D000470
GO:0044711IEAPLAZA Homologysingle-organism biosynthetic processHOM03D000470
GO:0005991IEAPLAZA Homologytrehalose metabolic processHOM03D000470
GO:0005984IEAPLAZA Homologydisaccharide metabolic processHOM03D000470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAInterProcatalytic activity
GO:0004805ISOPLAZA Integrative Orthologytrehalose-phosphatase activityOS10G40555 OS10G40550 OS02G44230

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003337Trehalose-phosphatase
IPR023214HAD-like domain
IPR006379HAD-superfamily hydrolase, subfamily IIB
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.