Gene: ATR_00069G01430 (Amborella trichopoda)

Overview

Gene Identifier
ATR_00069G01430
Transcript Identifier
ATR_00069G01430.1
Gene Type
Coding gene
Location
scaffold00069 : 2694053-2700646 : positive

Family

Gene family
HOM03D003497
(35 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Hydroxymethylglutaryl-CoA synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00069.144
idevm_27.model.AmTr_v1.0_scaffold00069.144

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAInterPrometabolic process
GO:0008299IEAInterProisoprenoid biosynthetic process
GO:0019287ISOPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT4G11820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004421IEAInterProhydroxymethylglutaryl-CoA synthase activity
GO:0003824IEAInterProcatalytic activity
GO:0003985ISOPLAZA Integrative Orthologyacetyl-CoA C-acetyltransferase activityAT4G11820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G11820
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G11820

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016039Thiolase-like
IPR010122Hydroxymethylglutaryl-CoA synthase, eukaryotic
IPR013746Hydroxymethylglutaryl-coenzyme A synthase C-terminal
IPR016038Thiolase-like, subgroup
IPR000590Hydroxymethylglutaryl-coenzyme A synthase, active site
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.