Gene: ATR_00032G02660 (Amborella trichopoda)

Overview

Gene Identifier
ATR_00032G02660
Transcript Identifier
ATR_00032G02660.1
Gene Type
Coding gene
Location
scaffold00032 : 5298730-5313976 : positive

Family

Gene family
HOM03D006077
(22 genes in 13 species)
specific family
Subfamily
ORTHO03D003501
(18 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
DSC E3 ubiquitin ligase complex subunit 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00032.267
idevm_27.model.AmTr_v1.0_scaffold00032.267

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827ISOPLAZA Integrative Orthologyplant-type cell wall modificationAT4G28370
GO:0048363ISOPLAZA Integrative Orthologymucilage pectin metabolic processAT4G28370
GO:0080001ISOPLAZA Integrative Orthologymucilage extrusion from seed coatAT4G28370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT4G28370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0012505ISOPLAZA Integrative Orthologyendomembrane systemAT4G28370

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011016Zinc finger, RING-CH-type
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.