Gene: ATR_00016G01490 (Amborella trichopoda)

Overview

Gene Identifier
ATR_00016G01490
Transcript Identifier
ATR_00016G01490.1
Gene Type
Coding gene
Location
scaffold00016 : 3370787-3385371 : negative

Family

Gene family
HOM03D000954
(96 genes in 16 species)
specific family
Subfamily
ORTHO03D001558
(21 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Pyruvate dehydrogenase E1 component subunit beta
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00016.152
idevm_27.model.AmTr_v1.0_scaffold00016.152

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAInterPrometabolic process
GO:0006086IEAInterProacetyl-CoA biosynthetic process from pyruvate
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT5G50850

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004739IEAInterPropyruvate dehydrogenase (acetyl-transferring) activity
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G50850
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT5G50850
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G50850
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT5G50850

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005475Transketolase-like, pyrimidine-binding domain
IPR027110Pyruvate dehydrogenase E1 component subunit beta
IPR009014Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR005476Transketolase, C-terminal
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.